Mercurial > repos > modencode-dcc > macs2

comparison tool_dependencies.xml @ 8:fff96b974166 draft

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author modencode-dcc
date Fri, 18 Jan 2013 14:13:54 -0500
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children 27b3fbd033d4
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7:30aa94c21bb7 8:fff96b974166
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <!--<set_environment version="1.0">
4 <environment_variable name="SCRIPT_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable>
5 </set_environment>-->
6 <package name="macs2" version="2.0.10.2">
7 <install version="1.0">
8 <actions>
9 <action type="download_by_url">https://github.com/modENCODE-DCC/Galaxy/blob/master/tools/tool_shed_dependencies/macs2/macs2pkg.tar?raw=true</action>
10 <action type="move_directory_files">
11 <source_directory>bin</source_directory>
12 <destination_directory>$INSTALL_DIR/bin</destination_directory>
13 </action>
14 <action type="move_directory_files">
15 <source_directory>lib</source_directory>
16 <destination_directory>$INSTALL_DIR/lib</destination_directory>
17 </action>
18 <action type="set_environment">
19 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
20 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python2.7/site-packages</environment_variable>
21 </action>
22 </actions>
23 </install>
24 <readme>Macs2 depends on having python2.7 installed on all nodes of the work cluster</readme>
25 </package>
26 </tool_dependency>