Mercurial > repos > modencode-dcc > macs2
diff tool_dependencies.xml @ 8:fff96b974166 draft
Uploaded
author | modencode-dcc |
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date | Fri, 18 Jan 2013 14:13:54 -0500 |
parents | |
children | 27b3fbd033d4 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Fri Jan 18 14:13:54 2013 -0500 @@ -0,0 +1,26 @@ +<?xml version="1.0"?> +<tool_dependency> + <!--<set_environment version="1.0"> + <environment_variable name="SCRIPT_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable> + </set_environment>--> + <package name="macs2" version="2.0.10.2"> + <install version="1.0"> + <actions> + <action type="download_by_url">https://github.com/modENCODE-DCC/Galaxy/blob/master/tools/tool_shed_dependencies/macs2/macs2pkg.tar?raw=true</action> + <action type="move_directory_files"> + <source_directory>bin</source_directory> + <destination_directory>$INSTALL_DIR/bin</destination_directory> + </action> + <action type="move_directory_files"> + <source_directory>lib</source_directory> + <destination_directory>$INSTALL_DIR/lib</destination_directory> + </action> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> + <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python2.7/site-packages</environment_variable> + </action> + </actions> + </install> + <readme>Macs2 depends on having python2.7 installed on all nodes of the work cluster</readme> + </package> +</tool_dependency>