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comparison larch_athena.xml @ 5:27015eaf9a78 draft

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planemo upload for repository https://github.com/MaterialsGalaxy/larch-tools/tree/main/larch_athena commit 47b59eb1f13fe9f4893acbf9e3e77341d303de73
author muon-spectroscopy-computational-project
date Mon, 20 May 2024 15:34:58 +0000
parents a0d3b0fe0fa3
children 30cdfd70f28d
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4:a0d3b0fe0fa3 5:27015eaf9a78
2 <description>generate Athena projects from XAFS data</description> 2 <description>generate Athena projects from XAFS data</description>
3 <macros> 3 <macros>
4 <!-- version of underlying tool (PEP 440) --> 4 <!-- version of underlying tool (PEP 440) -->
5 <token name="@TOOL_VERSION@">0.9.75</token> 5 <token name="@TOOL_VERSION@">0.9.75</token>
6 <!-- version of this tool wrapper (integer) --> 6 <!-- version of this tool wrapper (integer) -->
7 <token name="@WRAPPER_VERSION@">0</token> 7 <token name="@WRAPPER_VERSION@">1</token>
8 <!-- citation should be updated with every underlying tool version --> 8 <!-- citation should be updated with every underlying tool version -->
9 <!-- typical fields to update are version, month, year, and doi --> 9 <!-- typical fields to update are version, month, year, and doi -->
10 <token name="@TOOL_CITATION@">10.1088/1742-6596/430/1/012007</token> 10 <token name="@TOOL_CITATION@">10.1088/1742-6596/430/1/012007</token>
11 <xml name="format"> 11 <xml name="format">
12 <param name="format" type="select" display="radio" label="Input format" help="Whether data is in tabular or NeXus (h5) format, or has already saved as an Athena project"> 12 <param name="format" type="select" display="radio" label="Input format" help="Whether data is in tabular or NeXus (h5) format, or has already saved as an Athena project">
447 <assert_contents> 447 <assert_contents>
448 <has_size value="34400" delta="100"/> 448 <has_size value="34400" delta="100"/>
449 </assert_contents> 449 </assert_contents>
450 </output> 450 </output>
451 </test> 451 </test>
452 <!-- 19: Zip file with nested directories -->
453 <test expect_num_outputs="2">
454 <param name="is_zipped" value="true"/>
455 <param name="dat_file" value="nested.zip"/>
456 <param name="plot_graph" value="edge,flat,dmude"/>
457 <output_collection name="athena_project_file_collection" type="list" count="2"/>
458 <output_collection name="plot_collection" type="list" count="2"/>
459 </test>
452 </tests> 460 </tests>
453 <help><![CDATA[ 461 <help><![CDATA[
454 Using Larch, create an Athena project file from the input X-ray Absorption Fine Structure (XAFS) data file. 462 Using Larch, create an Athena project file from the input X-ray Absorption Fine Structure (XAFS) data file.
455 463
456 Accepts both tabular and NeXus/HDF5 formatted data or a zip file containing these formats. 464 Accepts both tabular and NeXus/HDF5 formatted data or a zip file containing these formats.