Mercurial > repos > muon-spectroscopy-computational-project > muspinsim

comparison muspinsim.xml @ 3:e002cee8f707 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/muon-spectroscopy-computational-project/muon-galaxy-tools/main/muspinsim commit 70a4d37ecdf5d586703cfc509922311e95d3205c
author muon-spectroscopy-computational-project
date Tue, 18 Jul 2023 13:25:55 +0000
parents 136ed45d1ea9
children 8af5948994b0
comparison
equal deleted inserted replaced
2:136ed45d1ea9 3:e002cee8f707
1 <tool id="muspinsim" name="MuSpinSim Simulate" version="@TOOL_VERSION@+galaxy@WRAPPER_VERSION@" python_template_version="3.5" profile="22.05" license="MIT"> 1 <tool id="muspinsim" name="MuSpinSim Simulate" version="@MUSPINSIM_VERSION@+galaxy@WRAPPER_VERSION@" python_template_version="3.5" profile="22.05" license="MIT">
2 <description>perform spin dynamics calculations for muon science experiments</description> 2 <description>perform spin dynamics calculations for muon science experiments</description>
3 <macros> 3 <macros>
4 <!-- version of underlying tool (PEP 440) -->
5 <token name="@TOOL_VERSION@">2.0.2</token>
6 <!-- version of this tool wrapper (integer) --> 4 <!-- version of this tool wrapper (integer) -->
7 <token name="@WRAPPER_VERSION@">0</token> 5 <token name="@WRAPPER_VERSION@">0</token>
8 <!-- citation should be updated with every underlying tool version --> 6 <import>muon_macros.xml</import>
9 <!-- typical fields to update are version, month, year, and doi -->
10 <token name="@TOOL_CITATION@">
11 @software{muspinsim,
12 author = {Sturniolo, Simone and Liborio, Leandro and Owen, Josh and Mudaraddi, Anish and Davies, Joel and Wilkinson, John and {Muon Spectroscopy Computational Project}},
13 license = {MIT},
14 title = {{muspinsim}},
15 url = {https://github.com/muon-spectroscopy-computational-project/muspinsim},
16 version = {v2.0.2},
17 month = {1},
18 year = {2023}
19 doi = {10.5281/zenodo.7568830}
20 }
21 </token>
22 </macros> 7 </macros>
23 <creator> 8 <creator>
24 <person givenName="Anish" familyName="Mudaraddi" identifier="https://orcid.org/0000-0002-2135-2705"/> 9 <person givenName="Anish" familyName="Mudaraddi" identifier="https://orcid.org/0000-0002-2135-2705"/>
25 <person givenName="Eli" familyName="Chadwick" url="https://github.com/elichad" identifier="https://orcid.org/0000-0002-0035-6475"/> 10 <person givenName="Eli" familyName="Chadwick" url="https://github.com/elichad" identifier="https://orcid.org/0000-0002-0035-6475"/>
26 <person givenName="Joel" familyName="Davies" url="https://github.com/joelvdavies" identifier="https://orcid.org/0000-0002-4153-6819"/> 11 <person givenName="Joel" familyName="Davies" url="https://github.com/joelvdavies" identifier="https://orcid.org/0000-0002-4153-6819"/>
27 <organization url="https://muon-spectroscopy-computational-project.github.io/index.html" name="The Muon Spectroscopy Computational Project"/> 12 <organization url="https://muon-spectroscopy-computational-project.github.io/index.html" name="The Muon Spectroscopy Computational Project"/>
28 </creator> 13 </creator>
29 <requirements> 14 <requirements>
30 <requirement type="package" version="@TOOL_VERSION@">muspinsim</requirement> 15 <requirement type="package" version="@MUSPINSIM_VERSION@">muspinsim</requirement>
31 </requirements> 16 </requirements>
32 <command detect_errors="exit_code"><![CDATA[ 17 <command detect_errors="exit_code"><![CDATA[
33 ## remove spaces in names 18 ## remove spaces in names
34 mu_sim_name=\$(sed 's/ //g' <<< '$mu_sim.name') && 19 mu_sim_name=\$(sed 's/ //g' <<< '$mu_sim.name') &&
35 ## input file name without extension 20 ## input file name without extension
152 Full documentation: https://muon-spectroscopy-computational-project.github.io/muspinsim/ 137 Full documentation: https://muon-spectroscopy-computational-project.github.io/muspinsim/
153 138
154 Command-line usage: muspinsim muspinsim.in 139 Command-line usage: muspinsim muspinsim.in
155 ]]></help> 140 ]]></help>
156 <citations> 141 <citations>
157 <citation type="bibtex"> 142 <citation type="doi">@MUSPINSIM_CITATION@</citation>
158 @TOOL_CITATION@
159 </citation>
160 </citations> 143 </citations>
161 </tool> 144 </tool>