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1 <tool id="muspinsim_config" name="MuSpinSim Configure" version="@TOOL_VERSION@+galaxy@WRAPPER_VERSION@" python_template_version="3.5" profile="22.01">
2 <description>define simulation parameters</description>
3 <macros>
4 <!-- version of underlying tool (PEP 440) -->
5 <token name="@TOOL_VERSION@">1.1.0</token>
6 <!-- version of this tool wrapper (integer) -->
7 <token name="@WRAPPER_VERSION@">0</token>
8 <!-- citation should be updated with every underlying tool version -->
9 <!-- typical fields to update are version, month, year, and doi -->
10 <token name="@TOOL_CITATION@">
11 @software{muspinsim,
12 author = {Sturniolo, Simone and Liborio, Leandro and Owen, Josh and Mudaraddi, Anish and {Muon Spectroscopy Computational Project}},
13 license = {MIT},
14 title = {{muspinsim}},
15 url = {https://github.com/muon-spectroscopy-computational-project/muspinsim},
16 version = {v1.1.0},
17 month = {5},
18 year = {2022},
19 doi = {10.5281/zenodo.6563074}
20 }
21 </token>
22 </macros>
23 <creator>
24 <person givenName="Anish" familyName="Mudaraddi" identifier="https://orcid.org/0000-0002-2135-2705"/>
25 <person givenName="Eli" familyName="Chadwick" url="https://github.com/elichad" identifier="https://orcid.org/0000-0002-0035-6475"/>
26 <organization url="https://muon-spectroscopy-computational-project.github.io/index.html" name="The Muon Spectroscopy Computational Project"/>
27 </creator>
28 <requirements>
29 <requirement type="package" version="@TOOL_VERSION@">muspinsim</requirement>
30 </requirements>
31 <command detect_errors="exit_code"><![CDATA[
32 cp ${__tool_directory__}/sample_fitting_data.dat ./fitting_data.dat &&
33 python ${__tool_directory__}/build_file.py inputs.json
34 ]]></command>
35 <configfiles>
36 <inputs name="inputs" filename="inputs.json" />
37 </configfiles>
38 <inputs>
39 <param type="text" name="out_file_prefix" label="Name" help="A name with which to label this configuration" optional="true" value="muspinsim" />
40 <section name="spins" expanded="true" title="Spins">
41 <repeat name="spins" title="Spins to simulate" min="1" help="Specify the spins to be used in the system. This should include a muon (mu) and one or more electrons (e)">
42 <conditional name="spin_options">
43 <param name="spin_preset" type="select" value="mu" label="Species" help="Select 'custom' to define own">
44 <option selected="true" value="mu">mu</option>
45 <option value="e">e</option>
46 <option value="custom">custom</option>
47 </param>
48 <when value="custom">
49 <param name="spin" optional="false" type="text" label="Species name"/>
50 <param name="atomic_mass" optional="true" type="integer" min="0" value="" label="Atomic mass" help="Leave blank to use default mass - whole numbers only"/>
51 </when>
52 <when value="mu"/>
53 <when value="e"/>
54 </conditional>
55 </repeat>
56 </section>
57 <section name="interaction_params" expanded="true" title="Spin Interactions" help="">
58 <repeat name="interactions" title="Interactions to simulate" help="Add couplings between spins, and/or dissipation terms. Interaction terms available: Zeeman, hyperfine, dipolar, quadrupolar or dissipation. See muspinsim docs for more info">
59 <conditional name="interaction_options">
60 <param name="interaction" type="select" label="Choose interaction type">
61 <option value="zeeman">Zeeman</option>
62 <option value="hyperfine">hyperfine</option>
63 <option value="dipolar">dipolar</option>
64 <option value="quadrupolar">quadrupolar</option>
65 <option value="dissipation">dissipation</option>
66 </param>
67 <when value="zeeman">
68 <param name="zeeman_index" type="integer" value="" label="Index of coupled spin" min="1"
69 help="Index refers to the order of the spins listed in 'spins' section. The first spin in the list has index 1, the second has index 2, and so on."/>
70 <param name="zeeman_vector" type="text" value="" label="Zeeman coupling vector"
71 help="Define 1X3 vector for local magnetic field coupling (T).
72 Allows default expressions, constants and functions (see help)"/>
73 </when>
74 <when value="hyperfine">
75 <param name="hfine_index" type="integer" value="" label="Index of nuclear coupled spin" min="1"
76 help="Non-electronic spin - muon or otherwise.
77 Index refers to the order of the spins listed in 'spins' section. The first spin in the list has index 1, the second has index 2, and so on."/>
78 <param name="hfine_e_index" type="integer" value="" optional="true" min="1" label="Index of electronic coupled spin"
79 help="Optional, will use first defined electronic spin if unspecified"/>
80 <param name="hfine_matrix" area="true" type="text" value="" label="Hyperfine coupling tensor"
81 help="Define 3X3 tensor for coupling between electron and non-electron spins (in MHz).
82 Allows default expressions, constants and functions (see help)">
83 <sanitizer>
84 <valid initial="string.printable">
85 </valid>
86 </sanitizer>
87 </param>
88 </when>
89 <when value="dipolar">
90 <param name="di_index" type="integer" value="" min="1" label="Index of 1st coupled spin"
91 help="Index refers to the order of the spins listed in 'spins' section. The first spin in the list has index 1, the second has index 2, and so on."/>
92 <param name="di_index_2" type="integer" value="" label="Index of 2nd coupled spin"
93 help="Index refers to the order of the spins listed in 'spins' section. The first spin in the list has index 1, the second has index 2, and so on."/>
94 <param name="di_vector" type="text" value="" label="Dipole coupling vector"
95 help="Define 1X3 vector for coupling between two spins (Angstrom).
96 Allows default expressions, constants and functions (see help)"/>
97 </when>
98 <when value="quadrupolar">
99 <param name="quad_index" type="integer" value="" label="Index of coupled spin"
100 help="Index refers to the order of the spins listed in 'spins' section. The first spin in the list has index 1, the second has index 2, and so on."/>
101 <param name="quad_matrix" area="true" type="text" value="" label="Electric Field Gradient tensor"
102 help="Define 3X3 tensor (in atomic units) for quadrupolar coupling.
103 Allows default expressions, constants and functions (see help).
104 Warning: spins with zero quadrupole moment will have zero coupling regardless of the input">
105 <sanitizer>
106 <valid initial="string.printable">
107 </valid>
108 </sanitizer>
109 </param>
110 </when>
111 <when value="dissipation">
112 <param name="dis_index" type="integer" value="" label="Index of spin with dissipation"
113 help="Index refers to the order of the spins listed in 'spins' section. The first spin in the list has index 1, the second has index 2, and so on."/>
114 <param name="dis_val" type="text" value="" label="Dissipation"
115 help="Define dissipation term (MHz).
116 Allows default expressions, constants and functions (see help)"/>
117 </when>
118 </conditional>
119 </repeat>
120 </section>
121 <section name="experiment_params" expanded="true" title="Experiment Parameters">
122 <conditional name="experiment">
123 <param name="experiment_preset" type="select" value='custom' display="radio" label="Experiment type"
124 help="Experiment preset to use. Avoided Level Crossing (ALC): sets polarization to longitudinal, x-axis to field and y-axis to integral.
125 Zero field: sets polarization to transverse and field to 0. Choose custom for no preset">
126 <option value="alc">Avoided Level Crossing (ALC)</option>
127 <option value="zero_field">Zero Field</option>
128 <option selected="true" value="custom">Custom</option>
129 </param>
130 <when value="alc">
131 <repeat name="fields" title="Fields" help="Magnetic fields">
132 <param name="field" type="text" value="0" label="Field"
133 optional="true" help="Optional, (default is 0).
134 Accepts 1X3 vector, or scalar value. Scalar value means field is assumed to be aligned with z axis.
135 Allows default expressions, constants and functions, plus MHz, muon_gyr constants and special 'range()' function (see help section)"/>
136 </repeat>
137 </when>
138 <when value="zero_field">
139 <param name="x_axis" type="select" value="time" display="radio" label="X axis"
140 help="Range to use as X axis for output file(s)">
141 <option selected="true" value="time">time</option>
142 <option value="field">field</option>
143 </param>
144 <param name="y_axis" type="select" value="asymmetry" display="radio" label="Y axis"
145 help="Range to use as y axis for output file(s)
146 Asymmetry: use muon's polarization.
147 Integral: use muon's polarization integral over time.
148 WARNING: if integral chosen, 'time' parameter is ignored, and cannot be used as x-axis parameter ">
149 <option value="integral">integral</option>
150 <option selected="true" value="asymmetry">asymmetry</option>
151 </param>
152 </when>
153 <when value="custom">
154 <param name="x_axis" type="select" value="time" display="radio" label="X axis"
155 help="Range to use as X axis for output file(s)">
156 <option selected="true" value="time">time</option>
157 <option value="field">field</option>
158 </param>
159 <param name="y_axis" type="select" value="asymmetry" display="radio" label="Y axis"
160 help="Range to use as y axis for output file(s)
161 Asymmetry: use muon's polarization.
162 Integral: use muon's polarization integral over time.
163 WARNING: if integral chosen, 'time' parameter is ignored, and cannot be used as x-axis parameter ">
164 <option value="integral">integral</option>
165 <option selected="true" value="asymmetry">asymmetry</option>
166 </param>
167 <repeat name="fields" title="Fields" help="Magnetic fields">
168 <param name="field" type="text" value="0" label="Field (T)"
169 optional="true" help="Optional, (default is 0).
170 Accepts 1X3 vector, or scalar value. Scalar value means field is assumed to be aligned with z axis.
171 Allows default expressions, constants and functions, plus MHz, muon_gyr constants and special 'range()' function (see help section)"/>
172 </repeat>
173 <repeat name="polarizations" title="Polarizations" help="The direction along which the muon
174 should be polarized when starting, as well as the one in which it will be measured.
175 Each entry will generate a separate calculation when muspinsim is run">
176 <conditional name="polarization_options">
177 <param name="polarization_preset" value="custom" type="select" display="radio" label="Polarization"
178 help="transverse: along x-axis, longitudinal: along z-axis, custom: define vector">
179 <option value="longitudinal">longditudinal</option>
180 <option value="transverse">transverse</option>
181 <option selected="true" value="custom">custom</option>
182 </param>
183 <when value="custom">
184 <param name="polarization" type="text" value="" label="Enter custom vector for polarization"
185 help="Accepts 1X3 vector.
186 Allows default expressions, constants and functions (see help section)"/>
187 </when>
188 <when value="longitudinal" />
189 <when value="transverse" />
190 </conditional>
191 </repeat>
192 </when>
193 </conditional>
194 <param name="average_axes" type="select" display="checkboxes" multiple="true" optional="true" value="orientation" label="Average axes"
195 help="Keywords that should have an average carried out over them. Each keyword ticked should have a range specified.
196 Keywords not ticked or set as X axis, but which have a range set, will generate separate calculations for each value in the range when muspinsim is run.">
197 <option selected="true" value="orientation">orientation</option>
198 <option value="polarization">polarization</option>
199 <option value="field">field</option>
200 <option value="time">time</option>
201 <option value="temperature">temperature</option>
202 </param>
203 <repeat name="orientations" title="Orientations" help="Orientations to use for crystallites - (define powder averages)">
204 <conditional name="orientation_options">
205 <param name="orientation_preset" type="select" display="radio" label="Orientation" optional="false"
206 help="Polar angles: Define two polar angles θ and ϕ, defining only the direction of the z-axis (recommended for powder averages).
207 Euler angles: Define 3 Euler angles defining a new frame, convention used is ZYZ by default.
208 Euler angles with weight: define 3 Euler angles and a weight (will be normalized automatically).
209 Euler angles helper function: eulrange(n).
210 Zaremba-Conroy-Wolfsberg helper function: zcw(n)">
211 <option value="2_polar">Polar angles</option>
212 <option value="3_euler">Euler angles</option>
213 <option value="4_euler">Euler angles with weight</option>
214 <option value="eulrange">Euler angles helper function (eulrange(n))</option>
215 <option selected="true" value="zcw">Zaremba-Conroy-Wolfsberg helper function (zcw(n))</option>
216 </param>
217 <when value="eulrange">
218 <param name="eul_n" type="text" value="0" label="n"
219 help="value for n for eulrange(n),
220 Allows default expressions, constants and functions.
221 WARNING: large values are more computationally expensive."
222 />
223 </when>
224 <when value="zcw">
225 <param name="zcw_n" type="text" value="0" label="n"
226 help="value for n for zcw(n)
227 Allows default expressions, constants and functions.
228 WARNING: large values are more computationally expensive."
229 />
230 </when>
231 <when value="2_polar">
232 <param name="theta" type="text" value="" label="θ (theta/inclination) angle"
233 help="All polar angle entries allow default expressions, constants and functions"/>
234 <param name="phi" type="text" value="" label="ϕ (phi/azimuth) angle"
235 help="All polar angle entries allow default expressions, constants and functions"/>
236 </when>
237 <when value="3_euler">
238 <param name="eul_1" type="text" value="" label="Euler angle 1"
239 help="All Euler angle entries allow default expressions, constants and functions"/>
240 <param name="eul_2" type="text" value="" label="Euler angle 2"
241 help="All Euler angle entries allow default expressions, constants and functions"/>
242 <param name="eul_3" type="text" value="" label="Euler angle 3"
243 help="All Euler angle entries allow default expressions, constants and functions"/>
244
245 </when>
246 <when value="4_euler">
247 <param name="eul_1" type="text" value="" label="Euler angle 1"
248 help="All Euler angle entries allow default expressions and constants"/>
249 <param name="eul_2" type="text" value="" label="Euler angle 2"
250 help="All Euler angle entries allow default expressions and constants"/>
251 <param name="eul_3" type="text" value="" label="Euler angle 3"
252 help="All Euler angle entries allow default expressions and constants"/>
253 <param name="weight" type="float" value="0" label="Weight"
254 help="Allows only floating point value, weights will automatically be normalised"/>
255 </when>
256 </conditional>
257 </repeat>
258 <param name="euler_convention" type="select" display="radio" label="Euler Convention"
259 help="Euler angle convention to use for orientation definitions (ignored if Euler angles not defined)">
260 <option selected="true" value="zyz">ZYZ</option>
261 <option value="zxz">ZXZ</option>
262 </param>
263 <repeat name="times" title="Time" help="A time or range of times (μs)">
264 <param name="time" type="text" label="Time"
265 help="Either a single time value or `range` function
266 Allows default expressions, default constants, and special 'range()' function (see help section)"
267 optional="true" value="range(0, 10, 101)"/>
268 </repeat>
269 <repeat name="temperatures" title="Temperature" help="Temperature or range of temperatures (K)">
270 <param name="temperature" type="text"
271 help="Either single value or 'range()' function
272 Allows default expressions, default constants, and special 'range()' function (see help section).
273 Warning: both density matrices and dissipative couplings for finite temperatures are only calculated approximatively, see muspinsim docs."
274 optional="true" value="inf"/>
275 </repeat>
276 </section>
277 <section name="fitting_params" expanded="true" title="Fitting Parameters">
278 <conditional name="fitting_options">
279 <param name="fitting" type="select" display="radio" optional="false" value="" label="Fit experimental data with simulations"
280 help="Fitting requires a file with data to fit. File must be given in muspinsim tool, or by manually setting filepath for keyword 'fitting_data' if running muspinsim externally">
281 <option value="true">Yes</option>
282 <option selected="true" value="">No</option>
283 </param>
284 <when value="true">
285 <param name="fitting_method" type="select" display="radio" optional="false" value="nelder-mead" label="Method to use to fit the data"
286 help="See the help section for a description of each method">
287 <option selected="true" value="nelder-mead">Nelder-Mead</option>
288 <option value="lbfgs">L-BFGS</option>
289 </param>
290 <repeat name="fitting_variables" title="Variable to fit to the experimental data">
291 <param name="var_name" type="text" optional="false" label="Name of the variable"/>
292 <param name="start_val" type="text" value="0" label="Starting value"
293 help="Allows default expressions, constants and functions, plus MHz, muon_gyr constants. Cannot contain names of other variables"/>
294 <param name="min_bound" type="text" value="-inf" label="minimum bound"
295 help="Allows default expressions, constants and functions, plus MHz, muon_gyr constants"/>
296 <param name="max_bound" type="text" value="inf" label="maximum bound"
297 help="Allows default expressions, constants and functions, plus MHz, muon_gyr constants"/>
298 </repeat>
299 <param name="fitting_tolerance" type="float" optional='true' value="" label="Fitting Tolerance"
300 help="Used as the tol parameter in Scipy's scipy.optimize.minimize method. Will use scipy defaults if left blank.
301 Does not accept expressions/functions/constants"
302 />
303 </when>
304 <when value=""/>
305 </conditional>
306 </section>
307 </inputs>
308 <outputs>
309 <data format="txt" label="muspinsim input file $out_file_prefix" name="out_file" from_work_dir="outfile.in" />
310 </outputs>
311 <tests>
312 <test>
313 <param name="out_file_prefix" value="test_1"/>
314 <param name="spin_preset" value="custom"/>
315 <param name="spin" value="H"/>
316 <param name="spin_preset" value="mu"/>
317 <param name="interaction" value="zeeman"/>
318 <param name="zeeman_index" value="1" />
319 <param name="zeeman_vector" value="1 0 0" />
320 <param name="zeeman_index" value="2" />
321 <param name="zeeman_vector" value="2 0 0" />
322 <output name="out_file" file="test_1.in" ftype="txt" compare="diff" />
323 </test>
324 <test>
325 <param name="out_file_prefix" value="test_2"/>
326 <param name="spin_preset" value="e"/>
327 <param name="spin_preset" value="mu"/>
328 <param name="interaction" value="hyperfine"/>
329 <param name="hfine_index" value="1" />
330 <param name="hfine_matrix" value="[1 0 0 sin(10) (5*2) 0 10*pi 5 cos(20)]"/>
331 <param name="time" value="range(0, 0.1)" />
332 <param name="y_axis" value="asymmetry" />
333 <param name="field" value="1.0" />
334 <param name="temperature" value="1.0" />
335 <output name="out_file" file="test_2.in" ftype="txt" compare="diff" />
336 </test>
337 <test>
338 <param name="out_file_prefix" value="test_3"/>
339 <param name="spin_preset" value="custom"/>
340 <param name="spin" value="H"/>
341 <param name="spin_preset" value="mu"/>
342 <param name="spin_preset" value="e"/>
343 <param name="interaction" value="hyperfine"/>
344 <param name="hfine_index" value="2" />
345 <param name="hfine_matrix" value="[580 5 10 5 580 9 10 9 580]"/>
346 <param name="interaction" value="hyperfine"/>
347 <param name="hfine_index" value="3" />
348 <param name="hfine_matrix" value="[(300/2) 3 4*10 ], [3 15*10 6-3+2] ,[4 5 15 ]"/>
349 <param name="average_axes" value="polarization,temperature" />
350 <param name="experiment_preset" value="alc" />
351 <param name="field" value="range(1.8, 2.6, 100)" />
352 <param name="orientation_preset" value="zcw" />
353 <param name="zcw_n" value="20" />
354 <output name="out_file" file="test_3.in" ftype="txt" compare="diff" />
355 </test>
356 <test>
357 <param name="out_file_prefix" value="test_4"/>
358 <param name="spin_preset" value="custom"/>
359 <param name="spin" value="F"/>
360 <param name="spin_preset" value="custom"/>
361 <param name="spin" value="F"/>
362 <param name="spin_preset" value="mu"/>
363 <param name="interaction" value="dipolar"/>
364 <param name="di_index" value="1"/>
365 <param name="di_index_2" value="2"/>
366 <param name="di_vector" value="0.9 0.9 0"/>
367 <param name="interaction" value="dipolar"/>
368 <param name="di_index" value="1"/>
369 <param name="di_index_2" value="3"/>
370 <param name="di_vector" value="-0.9 -0.9 0"/>
371 <param name="interaction" value="dissipation"/>
372 <param name="dis_index" value="1"/>
373 <param name="dis_val" value="0.5"/>
374 <param name="average_axes" value="" />
375 <param name="experiment_preset" value="custom" />
376 <param name="field" value="1.5e-2 1.0e-2 1.0e-2"/>
377 <param name="field" value="0.01"/>
378 <param name="polarization_preset" value="custom"/>
379 <param name="polarization" value="1 0 0"/>
380 <param name="time" value="range(0,8.0,1000)"/>
381 <param name="time" value="range(0,1.0)"/>
382 <param name="orientation_preset" value="eulrange"/>
383 <param name="eul_n" value="10"/>
384 <output name="out_file" file="test_4.in" ftype="txt" compare="diff" />
385 </test>
386 <test>
387 <param name="out_file_prefix" value="test_5"/>
388 <param name="spin_preset" value="mu"/>
389 <param name="interaction" value="dissipation"/>
390 <param name="dis_index" value="1"/>
391 <param name="dis_val" value="g"/>
392 <param name="experiment_preset" value="custom" />
393 <param name="field" value="1.0/muon_gyr" />
394 <param name="fitting" value="true"/>
395 <param name="var_name" value="g" />
396 <param name="min_bound" value="0.0" />
397 <param name="fitting_tolerance" value="1.0" />
398 <output name="out_file" file="test_5.in" ftype="txt" compare="diff" />
399 </test>
400 </tests>
401 <help><![CDATA[
402 Tool to create input parameter file for Muspinsim.
403
404
405 This tool creates a structured text file with keywords and values which describe the system to model for Muspinsim.
406 See muspinsim docs for more information https://muon-spectroscopy-computational-project.github.io/muspinsim/input/.
407
408
409 Muspinsim allows expressions and special functions to be used when defining certain keywords. This tool also allows this.
410 Check the hint at the bottom of each input to see what, if any, special function or expressions can be used.
411
412
413 Default expressions include the use of the operators :code:`+ - * /` and :code:`^` for exponentiation. Expressions
414 should not contain whitespace. For example, use :code:`1+2` not :code:`1 + 2`.
415
416
417 Default constants include:
418 - :code:`pi`: ratio of a circle and its diameter
419 - :code:`e`: base of the natural logarithm
420 - :code:`deg`: conversion factor between radians and degrees, equivalent to 180/pi
421 - :code:`inf`: infinity
422
423 Special constants include:
424 - :code:`muon_gyr`: gyromagnetic ratio of muon (135.5388 MHz/T)
425 - :code:`MHz`: :code:`1/(2*muon_gyr)`
426
427
428 Default functions include:
429 - :code:`sin(x)`: sine
430 - :code:`cos(x)`: cosine
431 - :code:`tan(x)`: tangent
432 - :code:`arcsin(x)`: inverse of the sine
433 - :code:`arccos(x)`: inverse of the cosine
434 - :code:`arctan(x)`: inverse of the tangent
435 - :code:`arctan2(y, x)`: inverse of the tangent taking two arguments as (sine, cosine) to resolve the quadrant
436 - :code:`exp(x)`: exponential with base e
437 - :code:`log(x)`: natural logarithm
438 - :code:`sqrt(x)`: square root
439
440 Special functions include:
441 - :code:`range(x, y, z)`: get z equally spaced values between x and y
442 - :code:`zcw(n)`: Zaremba-Conroy-Wolfsberg helper function
443 - :code:`eulrange(n)`: helper function to create regular grid of n × n × n Euler angles with appropriate weights.
444
445
446 To enter vectors or matrices the following formats are accepted:
447 - :code:`[[1, 2, 3], [4, 5, 6], [7, 8, 9]]`
448 - :code:`1 2 3 4 5 6 7 8 9`
449 - :code:`[1 2 3] [4 5 6] [7 8 9]`
450
451
452 The fitting (function minimization) algorithms available are:
453
454
455 Nelder-Mead
456 - A direct search method.
457 - Starting with a 'simplex' of candidates, the algorithm will iteratively move the position of the worst candidate towards the optimum until all candidates converge (have values within a predefined tolerance level).
458 - Scipy default tolerance is :code:`1e-4`
459
460
461 L-BFGS
462 - Limited Memory Broyden–Fletcher–Goldfarb–Shanno algorithm.
463 - A second-order Quasi-Newton optimization algorithm
464 - Makes use of second-order derivative (Hessian Matrix) to converge on optimum.
465 - Scipy default tolerance is :code:`1e-5`
466 ]]></help>
467 <citations>
468 <citation type="bibtex">
469 @article{nelder_mead_1965,
470 title={A Simplex Method for Function Minimization},
471 volume={7},
472 doi={10.1093/comjnl/7.4.308},
473 number={4},
474 journal={The Computer Journal},
475 author={Nelder, J. A. and Mead, R.},
476 year={1965},
477 pages={308-313}
478 }
479 </citation>
480 <citation type="bibtex">
481 @book{nocedal_wright_2006,
482 place={New York (NY)},
483 title={Numerical Optimization},
484 publisher={Springer},
485 author={Nocedal, Jorge and Wright, Stephen J},
486 year={2006}
487 }
488 </citation>
489 <citation type="bibtex">
490 @TOOL_CITATION@
491 </citation>
492 </citations>
493 </tool>