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comparison muspinsim_plot.xml @ 4:e15e8800c39e draft default tip

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planemo upload for repository https://github.com/muon-spectroscopy-computational-project/muon-galaxy-tools/main/muspinsim_plot commit 70a4d37ecdf5d586703cfc509922311e95d3205c
author muon-spectroscopy-computational-project
date Tue, 18 Jul 2023 13:26:26 +0000
parents d7a0a31760b1
children
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3:d7a0a31760b1 4:e15e8800c39e
2 <description>plot values generated from MuSpinSim</description> 2 <description>plot values generated from MuSpinSim</description>
3 <macros> 3 <macros>
4 <!-- version of underlying tool (PEP 440) --> 4 <!-- version of underlying tool (PEP 440) -->
5 <token name="@TOOL_VERSION@">3.5.1</token> 5 <token name="@TOOL_VERSION@">3.5.1</token>
6 <!-- version of this tool wrapper (integer) --> 6 <!-- version of this tool wrapper (integer) -->
7 <token name="@WRAPPER_VERSION@">1</token> 7 <token name="@WRAPPER_VERSION@">2</token>
8 <!-- citation should be updated with every underlying tool version --> 8 <!-- citation should be updated with every underlying tool version -->
9 <!-- typical fields to update are version, month, year, and doi --> 9 <!-- typical fields to update are version, month, year, and doi -->
10 <token name="@TOOL_CITATION@"> 10 <token name="@TOOL_CITATION@">10.1109/MCSE.2007.55</token>
11 @article{Hunter:2007, 11 <import>muon_macros.xml</import>
12 author = {Hunter, J. D.},
13 title = {Matplotlib: A 2D graphics environment},
14 journal = {Computing in Science &amp; Engineering},
15 volume = {9},
16 number = {3},
17 pages = {90--95},
18 abstract = {Matplotlib is a 2D graphics package used for Python for
19 application development, interactive scripting, and publication-quality
20 image generation across user interfaces and operating systems.},
21 publisher = {IEEE COMPUTER SOC},
22 doi = {10.1109/MCSE.2007.55},
23 year = {2007}
24 }
25 </token>
26 </macros> 12 </macros>
27 <creator> 13 <creator>
28 <person givenName="Anish" familyName="Mudaraddi" identifier="https://orcid.org/0000-0002-2135-2705"/> 14 <person givenName="Anish" familyName="Mudaraddi" identifier="https://orcid.org/0000-0002-2135-2705"/>
29 <person givenName="Eli" familyName="Chadwick" url="https://github.com/elichad" identifier="https://orcid.org/0000-0002-0035-6475"/> 15 <person givenName="Eli" familyName="Chadwick" url="https://github.com/elichad" identifier="https://orcid.org/0000-0002-0035-6475"/>
16 <person givenName="Patrick" familyName="Austin" url="https://github.com/patrick-austin" identifier="https://orcid.org/0000-0002-6279-7823"/>
30 <organization url="https://muon-spectroscopy-computational-project.github.io/index.html" name="The Muon Spectroscopy Computational Project"/> 17 <organization url="https://muon-spectroscopy-computational-project.github.io/index.html" name="The Muon Spectroscopy Computational Project"/>
31 </creator> 18 </creator>
32 <requirements> 19 <requirements>
33 <requirement type="package" version="@TOOL_VERSION@">matplotlib</requirement> 20 <requirement type="package" version="@TOOL_VERSION@">matplotlib</requirement>
34 </requirements> 21 </requirements>
80 </when> 67 </when>
81 </conditional> 68 </conditional>
82 </repeat> 69 </repeat>
83 </inputs> 70 </inputs>
84 <outputs> 71 <outputs>
85 <data format="pdf" name="out_file_pdf" from_work_dir="outfile.pdf"> 72 <data format="pdf" name="out_file_pdf" from_work_dir="outfile.pdf" label="PDF plot on ${on_string}">
86 <filter>(out_file_type == 'pdf')</filter> 73 <filter>(out_file_type == 'pdf')</filter>
87 </data> 74 </data>
88 <data format="png" name="out_file_png" from_work_dir="outfile.png"> 75 <data format="png" name="out_file_png" from_work_dir="outfile.png" label="PNG plot on ${on_string}">
89 <filter>(out_file_type == 'png')</filter> 76 <filter>(out_file_type == 'png')</filter>
90 </data> 77 </data>
91 </outputs> 78 </outputs>
92 <tests> 79 <tests>
93 <test expect_num_outputs="1"> 80 <test expect_num_outputs="1">
145 132
146 133
147 You can overlay multiple plots on top of each other by providing more than one data file. 134 You can overlay multiple plots on top of each other by providing more than one data file.
148 ]]></help> 135 ]]></help>
149 <citations> 136 <citations>
150 <citation type="bibtex"> 137 <citation type="doi">@TOOL_CITATION@</citation>
151 @TOOL_CITATION@ 138 <citation type="doi">@MUSPINSIM_CONCEPT@</citation>
152 </citation>
153 <citation type="bibtex">
154 @software{muspinsim,
155 author = {Sturniolo, Simone and Liborio, Leandro and Owen, Josh and Mudaraddi, Anish and {Muon Spectroscopy Computational Project}},
156 license = {MIT},
157 title = {{muspinsim}},
158 url = {https://github.com/muon-spectroscopy-computational-project/muspinsim},
159 version = {v1.1.0},
160 month = {5},
161 year = {2022},
162 doi = {10.5281/zenodo.6563074}
163 }
164 </citation>
165 </citations> 139 </citations>
166 </tool> 140 </tool>