Mercurial > repos > muon-spectroscopy-computational-project > pm_uep_opt
comparison run.sh @ 5:eea73e1f65cb draft default tip
planemo upload for repository https://github.com/muon-spectroscopy-computational-project/muon-galaxy-tools/main/pm_uep_opt commit 8e96fbcca17150ece3ee6bf15bf0969bd014a5ca
| author | muon-spectroscopy-computational-project |
|---|---|
| date | Wed, 26 Jul 2023 17:23:11 +0000 |
| parents | ec5f6b22417c |
| children |
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| 4:ec5f6b22417c | 5:eea73e1f65cb |
|---|---|
| 1 #! /bin/bash | 1 #! /bin/bash |
| 2 | 2 |
| 3 set -o errexit | 3 set -o errexit |
| 4 | 4 |
| 5 run(){ | 5 for x in $1/*/*/*.yaml |
| 6 if ! out=$(pm-uep-opt $1); then | 6 do |
| 7 echo 1>&2 "$out"; exit 1 | 7 |
| 8 if ! out=$(pm-uep-opt $x) | |
| 9 then | |
| 10 echo 1>&2 "$out"; exit 1 | |
| 8 else | 11 else |
| 9 echo "$out" | 12 echo "$out" |
| 10 fi | 13 fi |
| 11 } | 14 done || exit |
| 12 | 15 #pm-uep-opt |
| 13 pids=() | |
| 14 for x in $1/*/*/*.yaml; do | |
| 15 run $x & pids+=($!) | |
| 16 done | |
| 17 | |
| 18 declare -i failed=0 | |
| 19 for pid in ${pids[@]}; do | |
| 20 if ! wait $pid; then | |
| 21 failed+=1 | |
| 22 fi | |
| 23 done | |
| 24 | |
| 25 if [ $failed -eq ${#pids[@]} ]; then | |
| 26 >&2 echo "ERROR: All optimisations failed" | |
| 27 exit 1 | |
| 28 elif [ $failed -eq 0 ]; then | |
| 29 echo "All optimisations succeeded" | |
| 30 exit 0 | |
| 31 else | |
| 32 echo "WARNING: $failed optimisation(s) failed" | |
| 33 exit 0 | |
| 34 fi |