Mercurial > repos > mvdbeek > bam_readtagger

comparison findcluster.xml @ 20:03415763c62c draft

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planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 62ae1272b167d6bc411f95fb324df9f6286f8450-dirty
author mvdbeek
date Wed, 19 Apr 2017 16:23:12 -0400
parents 97c1b92dbd28
children 1c91108a80d5
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19:97c1b92dbd28 20:03415763c62c
1 <tool id="findcluster" name="Find clusters of reads" version="0.3.13"> 1 <tool id="findcluster" name="Find clusters of reads" version="0.3.14">
2 <description>in bam files</description> 2 <description>in bam files</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.3.13">readtagger</requirement> 4 <requirement type="package" version="0.3.14">readtagger</requirement>
5 </requirements> 5 </requirements>
6 <version_command>findcluster --version</version_command> 6 <version_command>findcluster --version</version_command>
7 <command detect_errors="aggressive"><![CDATA[ 7 <command detect_errors="aggressive"><![CDATA[
8 ln -f -s $input input.bam && 8 ln -f -s $input input.bam &&
9 ln -f -s $input.metadata.bam_index input.bam.bai && 9 ln -f -s $input.metadata.bam_index input.bam.bai &&