Mercurial > repos > mvdbeek > bam_readtagger
comparison bam_readtagger.xml @ 5:a3c2c0f6abc9 draft
planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 76080bdc9e0d86e391587c2e147b9645e5d058d4-dirty
author | mvdbeek |
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date | Thu, 02 Mar 2017 11:08:05 -0500 |
parents | 7625c594bc37 |
children | 50471302eb73 |
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4:7625c594bc37 | 5:a3c2c0f6abc9 |
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1 <tool id="bam_readtagger" name="Tag alignment files" version="0.3.0"> | 1 <tool id="bam_readtagger" name="Tag alignment files" version="0.3.1"> |
2 <description>from multiple bam files</description> | 2 <description>from multiple bam files</description> |
3 <macros> | 3 <macros> |
4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
5 </macros> | 5 </macros> |
6 <requirements> | 6 <requirements> |
7 <requirement type="package" version="0.3.0">readtagger</requirement> | 7 <requirement type="package" version="0.3.1">readtagger</requirement> |
8 </requirements> | 8 </requirements> |
9 <command detect_errors="aggressive"><![CDATA[ | 9 <command detect_errors="aggressive"><![CDATA[ |
10 readtagger -t '$tag_file' -a | 10 readtagger -t '$tag_file' -a |
11 #for $element in $alignment_series | 11 #for $element in $alignment_series |
12 '$element.annotate_with':$element.r_tag:$element.m_tag | 12 '$element.annotate_with':$element.r_tag:$element.m_tag |