Mercurial > repos > mvdbeek > bam_readtagger

diff bam_readtagger.xml @ 22:42fefb316c95 draft

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planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 16f35b0e373f4cbd33f1bc6aef4a13b7fd2eca12-dirty
author mvdbeek
date Sun, 23 Apr 2017 15:58:53 -0400
parents 1c91108a80d5
children 1323ffbc8785
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--- a/bam_readtagger.xml	Thu Apr 20 11:04:08 2017 -0400
+++ b/bam_readtagger.xml	Sun Apr 23 15:58:53 2017 -0400
@@ -1,10 +1,10 @@
-<tool id="bam_readtagger" name="Tag alignment files" version="0.3.15">
+<tool id="bam_readtagger" name="Tag alignment files" version="0.3.16">
     <description>from multiple bam files</description>
     <macros>
         <import>macros.xml</import>
     </macros>
     <requirements>
-        <requirement type="package" version="0.3.15">readtagger</requirement>
+        <requirement type="package" version="0.3.16">readtagger</requirement>
     </requirements>
     <command detect_errors="aggressive"><![CDATA[
         readtagger -t '$tag_file' -a
@@ -16,6 +16,7 @@
         $discarded
         $verified
         $discard_proper_pairs
+        --cores "\${GALAXY_SLOTS:-2}"
         -o '$tagged_file'
     ]]></command>
     <inputs>