diff filter_insertions.xml @ 52:b03c6d8c37c1 draft

planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 45d0337e2a0d35e9a83d9c87c005c876c45ee054
author mvdbeek
date Wed, 12 Jun 2019 14:23:52 -0400
parents 08656cd6c989
children 5eb0ec276ea5
line wrap: on
line diff
--- a/filter_insertions.xml	Fri Feb 15 02:31:18 2019 -0500
+++ b/filter_insertions.xml	Wed Jun 12 14:23:52 2019 -0400
@@ -1,7 +1,7 @@
-<tool id="confirm_insertions" name="Confirm or discard insertions" version="0.4.19">
+<tool id="confirm_insertions" name="Confirm or discard insertions" version="0.5.0">
     <description>based on softclips in control files</description>
     <requirements>
-        <requirement type="package" version="0.4.19">readtagger</requirement>
+        <requirement type="package" version="0.5.0">readtagger</requirement>
     </requirements>
     <version_command>confirm_insertions --version</version_command>
     <command detect_errors="aggressive"><![CDATA[
@@ -20,9 +20,9 @@
         $output_discard
     ]]></command>
     <inputs>
-        <param name="putative_insertions" label="Path to filtered putative insertinos" argument="--putative_insertions_path" type="data" format="gff3"/>
-        <param name="all_insertions" label="Path to all unfiltered insertions" argument="--all_treatments_path" type="data" format="gff3"/>
-        <param name="all_controls" label="Path to all unfiltered insertions from one or more control samples" argument="--all_controls_path" multiple="True" type="data" format="gff3"/>
+        <param name="putative_insertions" label="Select dataset with filtered putative insertions" argument="--putative_insertions_path" type="data" format="gff3"/>
+        <param name="all_insertions" label="Select datasets with all unfiltered insertions" argument="--all_treatments_path" type="data" format="gff3"/>
+        <param name="all_controls" label="Select datasets with all unfiltered insertions from one or more control samples" argument="--all_controls_path" multiple="True" type="data" format="gff3"/>
         <param name="output_discard" label="Output discarded records? Discarded records will be marked as failed." truevalue="--output_discarded_records" falsevalue="--no_output_discarded_records" checked="True" type="boolean"/>
     </inputs>
     <outputs>