Mercurial > repos > mvdbeek > bam_readtagger
view deploy.sh @ 79:c42dd2551c9c draft
"planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit df2b1a906b8772810d995d7887e4e8f04aabc13a"
author | mvdbeek |
---|---|
date | Tue, 07 Apr 2020 13:41:14 -0400 |
parents | 39d9bc17ec74 |
children |
line wrap: on
line source
#!/bin/bash # this script uploads galaxy tools in the current directory to the galaxy toolsheds set -e CURRENT_DIR=$(dirname $0) echo "Installing planemo" # Would be great if the dependencies would persist in deployment mode pip install planemo echo "Deploying to Testtoolshed ..." planemo shed_update -r --force_repository_creation -t testtoolshed --shed_key_from_env TTS_KEY "$CURRENT_DIR" echo "Deploying to Toolshed ..." planemo shed_update -r --force_repository_creation -t toolshed --shed_key_from_env TS_KEY $CURRENT_DIR echo "Successfully deployed to toolsheds" exit 0