# HG changeset patch
# User mvdbeek
# Date 1493297301 14400
# Node ID 6492af8015a67ab55164078a2053a533bb6086e8
# Parent  9c7b5c90592006794293cf68962bde53817cc341
planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 8980879ce15668ac35db2fc767244bd88959173c-dirty

diff -r 9c7b5c905920 -r 6492af8015a6 add_matesequence.xml
--- a/add_matesequence.xml	Tue Apr 25 14:54:13 2017 -0400
+++ b/add_matesequence.xml	Thu Apr 27 08:48:21 2017 -0400
@@ -1,7 +1,7 @@
-<tool id="add_matesequence" name="Add matesequence" version="0.3.18">
+<tool id="add_matesequence" name="Add matesequence" version="0.3.19">
     <description>into tag field</description>
     <requirements>
-        <requirement type="package" version="0.3.18">readtagger</requirement>
+        <requirement type="package" version="0.3.19">readtagger</requirement>
     </requirements>
     <version_command>add_matesequence --version</version_command>
     <command detect_errors="aggressive"><![CDATA[
diff -r 9c7b5c905920 -r 6492af8015a6 allow_dovetailing.xml
--- a/allow_dovetailing.xml	Tue Apr 25 14:54:13 2017 -0400
+++ b/allow_dovetailing.xml	Thu Apr 27 08:48:21 2017 -0400
@@ -1,7 +1,7 @@
-<tool id="allow_dovetailing" name="Allow dovetailing" version="0.3.18">
+<tool id="allow_dovetailing" name="Allow dovetailing" version="0.3.19">
     <description>modifies proper_pair flag in bam files</description>
     <requirements>
-        <requirement type="package" version="0.3.18">readtagger</requirement>
+        <requirement type="package" version="0.3.19">readtagger</requirement>
     </requirements>
     <command detect_errors="aggressive"><![CDATA[
         allow_dovetailing -i '$input' -o '$output'
diff -r 9c7b5c905920 -r 6492af8015a6 bam_readtagger.xml
--- a/bam_readtagger.xml	Tue Apr 25 14:54:13 2017 -0400
+++ b/bam_readtagger.xml	Thu Apr 27 08:48:21 2017 -0400
@@ -1,10 +1,10 @@
-<tool id="bam_readtagger" name="Tag alignment files" version="0.3.18">
+<tool id="bam_readtagger" name="Tag alignment files" version="0.3.19">
     <description>from multiple bam files</description>
     <macros>
         <import>macros.xml</import>
     </macros>
     <requirements>
-        <requirement type="package" version="0.3.18">readtagger</requirement>
+        <requirement type="package" version="0.3.19">readtagger</requirement>
     </requirements>
     <command detect_errors="aggressive"><![CDATA[
         readtagger -t '$tag_file' -a
diff -r 9c7b5c905920 -r 6492af8015a6 findcluster.xml
--- a/findcluster.xml	Tue Apr 25 14:54:13 2017 -0400
+++ b/findcluster.xml	Thu Apr 27 08:48:21 2017 -0400
@@ -1,7 +1,7 @@
-<tool id="findcluster" name="Find clusters of reads" version="0.3.18">
+<tool id="findcluster" name="Find clusters of reads" version="0.3.19">
     <description>in bam files</description>
     <requirements>
-        <requirement type="package" version="0.3.18">readtagger</requirement>
+        <requirement type="package" version="0.3.19">readtagger</requirement>
     </requirements>
     <version_command>findcluster --version</version_command>
     <command detect_errors="aggressive"><![CDATA[
diff -r 9c7b5c905920 -r 6492af8015a6 update_mapq.xml
--- a/update_mapq.xml	Tue Apr 25 14:54:13 2017 -0400
+++ b/update_mapq.xml	Thu Apr 27 08:48:21 2017 -0400
@@ -1,7 +1,7 @@
-<tool id="update_mapq" name="Update MAPQ score" version="0.3.18">
+<tool id="update_mapq" name="Update MAPQ score" version="0.3.19">
     <description>of supplementary alignments</description>
     <requirements>
-        <requirement type="package" version="0.3.18">readtagger</requirement>
+        <requirement type="package" version="0.3.19">readtagger</requirement>
     </requirements>
     <version_command>update_mapq --version</version_command>
     <command detect_errors="aggressive"><![CDATA[
diff -r 9c7b5c905920 -r 6492af8015a6 write_supplementary_fastq.xml
--- a/write_supplementary_fastq.xml	Tue Apr 25 14:54:13 2017 -0400
+++ b/write_supplementary_fastq.xml	Thu Apr 27 08:48:21 2017 -0400
@@ -1,7 +1,7 @@
-<tool id="write_supplementary_fastq" name="Extract supplementary alignments" version="0.3.18">
+<tool id="write_supplementary_fastq" name="Extract supplementary alignments" version="0.3.19">
     <description>from SAM/BAM alignment files as FASTQ</description>
     <requirements>
-        <requirement type="package" version="0.3.18">readtagger</requirement>
+        <requirement type="package" version="0.3.19">readtagger</requirement>
     </requirements>
     <version_command>write_supplementary_fastq --version</version_command>
     <command detect_errors="aggressive"><![CDATA[