# HG changeset patch
# User mvdbeek
# Date 1489080330 18000
# Node ID c179d081b6ba3bd315b1316d1bac37633336a541
# Parent  53b71263e2a2fa38b375a78ef7b7aea0846793ac
planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 435b71c148f373d500847b158c1bbdfb2c8c7978-dirty

diff -r 53b71263e2a2 -r c179d081b6ba add_matesequence.xml
--- a/add_matesequence.xml	Wed Mar 08 05:14:25 2017 -0500
+++ b/add_matesequence.xml	Thu Mar 09 12:25:30 2017 -0500
@@ -1,7 +1,7 @@
-<tool id="add_matesequence" name="Add matesequence" version="0.3.5">
+<tool id="add_matesequence" name="Add matesequence" version="0.3.6">
     <description>into tag field</description>
     <requirements>
-        <requirement type="package" version="0.3.5">readtagger</requirement>
+        <requirement type="package" version="0.3.6">readtagger</requirement>
     </requirements>
     <version_command>add_matesequence --version</version_command>
     <command detect_errors="aggressive"><![CDATA[
diff -r 53b71263e2a2 -r c179d081b6ba allow_dovetailing.xml
--- a/allow_dovetailing.xml	Wed Mar 08 05:14:25 2017 -0500
+++ b/allow_dovetailing.xml	Thu Mar 09 12:25:30 2017 -0500
@@ -1,7 +1,7 @@
-<tool id="allow_dovetailing" name="Allow dovetailing" version="0.3.5">
+<tool id="allow_dovetailing" name="Allow dovetailing" version="0.3.6">
     <description>modifies proper_pair flag in bam files</description>
     <requirements>
-        <requirement type="package" version="0.3.5">readtagger</requirement>
+        <requirement type="package" version="0.3.6">readtagger</requirement>
     </requirements>
     <command detect_errors="aggressive"><![CDATA[
         allow_dovetailing -i '$input' -o '$output'
diff -r 53b71263e2a2 -r c179d081b6ba bam_readtagger.xml
--- a/bam_readtagger.xml	Wed Mar 08 05:14:25 2017 -0500
+++ b/bam_readtagger.xml	Thu Mar 09 12:25:30 2017 -0500
@@ -1,10 +1,10 @@
-<tool id="bam_readtagger" name="Tag alignment files" version="0.3.5">
+<tool id="bam_readtagger" name="Tag alignment files" version="0.3.6">
     <description>from multiple bam files</description>
     <macros>
         <import>macros.xml</import>
     </macros>
     <requirements>
-        <requirement type="package" version="0.3.5">readtagger</requirement>
+        <requirement type="package" version="0.3.6">readtagger</requirement>
     </requirements>
     <command detect_errors="aggressive"><![CDATA[
         readtagger -t '$tag_file' -a
diff -r 53b71263e2a2 -r c179d081b6ba findcluster.xml
--- a/findcluster.xml	Wed Mar 08 05:14:25 2017 -0500
+++ b/findcluster.xml	Thu Mar 09 12:25:30 2017 -0500
@@ -1,7 +1,7 @@
-<tool id="findcluster" name="Find clusters of reads" version="0.3.5">
+<tool id="findcluster" name="Find clusters of reads" version="0.3.6">
     <description>in bam files</description>
     <requirements>
-        <requirement type="package" version="0.3.5">readtagger</requirement>
+        <requirement type="package" version="0.3.6">readtagger</requirement>
     </requirements>
     <version_command>findcluster --version</version_command>
     <command detect_errors="aggressive"><![CDATA[
diff -r 53b71263e2a2 -r c179d081b6ba update_mapq.xml
--- a/update_mapq.xml	Wed Mar 08 05:14:25 2017 -0500
+++ b/update_mapq.xml	Thu Mar 09 12:25:30 2017 -0500
@@ -1,7 +1,7 @@
-<tool id="update_mapq" name="Update MAPQ score" version="0.3.5">
+<tool id="update_mapq" name="Update MAPQ score" version="0.3.6">
     <description>of supplementary alignments</description>
     <requirements>
-        <requirement type="package" version="0.3.5">readtagger</requirement>
+        <requirement type="package" version="0.3.6">readtagger</requirement>
     </requirements>
     <version_command>update_mapq --version</version_command>
     <command detect_errors="aggressive"><![CDATA[
diff -r 53b71263e2a2 -r c179d081b6ba write_supplementary_fastq.xml
--- a/write_supplementary_fastq.xml	Wed Mar 08 05:14:25 2017 -0500
+++ b/write_supplementary_fastq.xml	Thu Mar 09 12:25:30 2017 -0500
@@ -1,7 +1,7 @@
-<tool id="write_supplementary_fastq" name="Extract supplementary alignments" version="0.3.5">
+<tool id="write_supplementary_fastq" name="Extract supplementary alignments" version="0.3.6">
     <description>from SAM/BAM alignment files as FASTQ</description>
     <requirements>
-        <requirement type="package" version="0.3.5">readtagger</requirement>
+        <requirement type="package" version="0.3.6">readtagger</requirement>
     </requirements>
     <version_command>write_supplementary_fastq --version</version_command>
     <command detect_errors="aggressive"><![CDATA[