Mercurial > repos > mvdbeek > damidseq_findpeaks

diff find_peaks @ 12:7b0ca503bb95 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/damidseq_findpeaks commit 5bf4f4dbd82988d1612d951d69125bc5f5b439be-dirty
author mvdbeek
date Thu, 14 Jun 2018 11:14:52 -0400
parents be830200e987
children
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--- a/find_peaks	Thu Jun 14 09:08:32 2018 -0400
+++ b/find_peaks	Thu Jun 14 11:14:52 2018 -0400
@@ -410,7 +410,7 @@
 		
 		next unless $start;
 		
-		$score = 0 if $score eq "NA";
+		$score = 0 if $score eq "NA" or $score eq 0.0;
 		
 		push (@$in_ref, [$chr, $start, $end, $score]);
 	}
@@ -436,7 +436,6 @@
 	foreach my $l (@$in_ref) {	
 		my ($chr, $start, $end, $score) = @$l;
 		next unless $score;
-		$score = 0 if $score eq "NA";
 		$total_coverage += $end-$start;
 		push @frags, $score;
 	}