Mercurial > repos > mvdbeek > docker_scriptrunner
comparison test-data/tf2_test_runme.py @ 0:21d312776891 draft
planemo upload for repository https://github.com/mvdbeek/docker_scriptrunner/ commit 30f8264cdd67d40dec8acde6407f32152e6a29c1-dirty
| author | mvdbeek |
|---|---|
| date | Sat, 09 Jul 2016 16:57:13 -0400 |
| parents | |
| children |
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| -1:000000000000 | 0:21d312776891 |
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| 1 # bog standard argparse for 3 possible comma separated lists | |
| 2 # followed by some silly reverse each row code provided as an example | |
| 3 # you're supposed to replace it with your great code.. | |
| 4 import argparse | |
| 5 import copy | |
| 6 | |
| 7 argp = argparse.ArgumentParser() | |
| 8 argp.add_argument('--INNAMES', default=None) | |
| 9 argp.add_argument('--INPATHS', default=None) | |
| 10 argp.add_argument('--OUTPATH', default=None) | |
| 11 argp.add_argument('--additional_parameters', default=[], action="append") | |
| 12 argp.add_argument('otherargs', nargs=argparse.REMAINDER) | |
| 13 args = argp.parse_args() | |
| 14 fout = open(args.OUTPATH, 'w') | |
| 15 sins = open(args.INPATHS.split(',')[0]).readlines() | |
| 16 for i, sin in enumerate(sins): | |
| 17 row = sin.strip().split('\t') | |
| 18 rrow = copy.copy(row) | |
| 19 lrow = len(row) | |
| 20 if (lrow > 1): | |
| 21 for j in range(lrow): | |
| 22 rrow[j] = row[lrow - j - 1] | |
| 23 fout.write('\t'.join(rrow)) | |
| 24 fout.write('\n') | |
| 25 fout.close() |