Mercurial > repos > mzhuang > chess_preprocessor

comparison chess_preprocessor.xml @ 1:0545899061d3 draft

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"planemo upload"
author mzhuang
date Thu, 23 Sep 2021 23:07:49 +0000
parents 4d2a2268a17a
children 43a20d0e2985
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0:4d2a2268a17a 1:0545899061d3
8 8
9 ##source ~/.bashrc;conda activate pulsar; 9 ##source ~/.bashrc;conda activate pulsar;
10 ##source ~/.bashrc; conda activate __hexrd@0.8.0; 10 ##source ~/.bashrc; conda activate __hexrd@0.8.0;
11 mkdir -p output; 11 mkdir -p output;
12 cd output; 12 cd output;
13 #set $history_id=$__app__.security.encode_id($output.creating_job.history.id) 13 ##set $history_id=$__app__.security.encode_id($output.creating_job.history.id)
14 echo '$history_id' >> '$output'; 14 ##echo '$history_id' >> '$output';
15 15
16 #if $input_source_conditional.input_source == "input_source_history" 16 #if $input_source_conditional.input_source == "input_source_history"
17 #set $input_type = $input_source_conditional.input_type_conditional.input_type 17 #set $input_type = $input_source_conditional.input_type_conditional.input_type
18 #if $input_type == "single" 18 #if $input_type == "single"
19 #set $input_data = $input_source_conditional.input_type_conditional.fastq_input1 19 #set $input_data = $input_source_conditional.input_type_conditional.fastq_input1