Mercurial > repos > nanette > nanette_test
comparison test_script_path.xml @ 1:a0cbbd0dfcc0 draft
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| author | nanette |
|---|---|
| date | Tue, 20 Aug 2013 08:36:34 -0400 |
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| 0:2e55478e150b | 1:a0cbbd0dfcc0 |
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| 1 <tool id="script_path" name="Test" version="1.0.0"> | |
| 2 <description>script path</description> | |
| 3 <requirements> | |
| 4 <requirement type="set_environment">SCRIPT_PATH</requirement> | |
| 5 </requirements> | |
| 6 <command interpreter="python"> | |
| 7 test_script_path.py --input1 $input1 --output1 $output1 | |
| 8 </command> | |
| 9 <inputs> | |
| 10 <param label="Gene Universe file" name="input1" type="data" format="tabular" help="A tabular file with the full set of genes from the study (gene universe)"></param> | |
| 11 </inputs> | |
| 12 <outputs> | |
| 13 <data format="tabular" name="output1" /> | |
| 14 </outputs> | |
| 15 <requirements> | |
| 16 </requirements> | |
| 17 <tests> | |
| 18 <test> | |
| 19 </test> | |
| 20 </tests> | |
| 21 <help> | |
| 22 | |
| 23 **What it does** | |
| 24 | |
| 25 This tool uses the topGO R package to determine the enriched GO terms, for one or more gene lists simultaneously. | |
| 26 | |
| 27 </help> | |
| 28 </tool> |