Mercurial > repos > nanettec > go_enrichment
view go_enrichment/test-data/output/GO_enrichment_cis/hotspot2_cis_GO_table.txt @ 0:7becbd7bf5d5 draft
Uploaded
author | nanettec |
---|---|
date | Fri, 18 Mar 2016 05:29:58 -0400 |
parents | |
children |
line wrap: on
line source
BP_GO.ID "Term" "Annotated" "Significant" "Expected" "classicFisher.p.val" "classicFisher.adj.p.val" "p.val<0.05" "p.val<0.01" "adj.p.val<0.05" "GeneIDs_significant" "GO:0006486" "protein glycosylation" 63 2 0.11 "0.0052" 1 "*" "*" "" "A_92_P013928;A_92_P024307" "GO:0009100" "glycoprotein metabolic process" 63 2 0.11 "0.0052" 1 "*" "*" "" "A_92_P013928;A_92_P024307" "GO:0009101" "glycoprotein biosynthetic process" 63 2 0.11 "0.0052" 1 "*" "*" "" "A_92_P013928;A_92_P024307" "GO:0043413" "macromolecule glycosylation" 63 2 0.11 "0.0052" 1 "*" "*" "" "A_92_P013928;A_92_P024307" "GO:0070085" "glycosylation" 71 2 0.12 "0.0065" 1 "*" "*" "" "A_92_P013928;A_92_P024307" "GO:0034645" "cellular macromolecule biosynthetic proc..." 2056 8 3.54 "0.0165" 1 "*" "" "" "A_92_P007586;A_92_P011760;A_92_P013928;A_92_P015153;A_92_P016260;A_92_P019496;A_92_P024307;A_92_P027578" "GO:0009059" "macromolecule biosynthetic process" 2059 8 3.54 "0.0167" 1 "*" "" "" "A_92_P007586;A_92_P011760;A_92_P013928;A_92_P015153;A_92_P016260;A_92_P019496;A_92_P024307;A_92_P027578" "GO:0006487" "protein N-linked glycosylation" 13 1 0.02 "0.0222" 1 "*" "" "" "A_92_P024307" "GO:0016569" "covalent chromatin modification" 18 1 0.03 "0.0306" 1 "*" "" "" "A_92_P016260" "GO:0016570" "histone modification" 18 1 0.03 "0.0306" 1 "*" "" "" "A_92_P016260" "GO:0043170" "macromolecule metabolic process" 5113 13 8.8 "0.0518" 1 "" "" "" "A_92_P002418;A_92_P007586;A_92_P011760;A_92_P013928;A_92_P015153;A_92_P016260;A_92_P019496;A_92_P019820;A_92_P022119;A_92_P024307;A_92_P027578;A_92_P032219;A_92_P034803" "GO:0016568" "chromatin modification" 38 1 0.07 "0.0635" 1 "" "" "" "A_92_P016260" "GO:0032313" "regulation of Rab GTPase activity" 41 1 0.07 "0.0683" 1 "" "" "" "A_92_P039188" "GO:0032482" "Rab protein signal transduction" 41 1 0.07 "0.0683" 1 "" "" "" "A_92_P039188" "GO:0032483" "regulation of Rab protein signal transdu..." 41 1 0.07 "0.0683" 1 "" "" "" "A_92_P039188" "GO:0019538" "protein metabolic process" 3235 9 5.57 "0.0779" 1 "" "" "" "A_92_P002418;A_92_P011760;A_92_P013928;A_92_P016260;A_92_P019820;A_92_P022119;A_92_P024307;A_92_P032219;A_92_P034803" "GO:0009719" "response to endogenous stimulus" 50 1 0.09 "0.0827" 1 "" "" "" "A_92_P015153" "GO:0009725" "response to hormone stimulus" 50 1 0.09 "0.0827" 1 "" "" "" "A_92_P015153" "GO:0010033" "response to organic substance" 50 1 0.09 "0.0827" 1 "" "" "" "A_92_P015153" "GO:0015850" "organic alcohol transport" 56 1 0.1 "0.0922" 1 "" "" "" "A_92_P010334" MF_GO.ID "Term" "Annotated" "Significant" "Expected" "classicFisher.p.val" "classicFisher.adj.p.val" "p.val<0.05" "p.val<0.01" "adj.p.val<0.05" "GeneIDs_significant" "GO:0004415" "hyalurononglucosaminidase activity" 1 1 0 "0.0015" 1 "*" "*" "" "A_92_P011760" "GO:0004017" "adenylate kinase activity" 2 1 0 "0.0030" 1 "*" "*" "" "A_92_P019496" "GO:0003830" "beta-1,4-mannosylglycoprotein 4-beta-N-a..." 7 1 0.01 "0.0105" 1 "*" "" "" "A_92_P024307" "GO:0015929" "hexosaminidase activity" 10 1 0.02 "0.0150" 1 "*" "" "" "A_92_P011760" "GO:0019201" "nucleotide kinase activity" 15 1 0.02 "0.0224" 1 "*" "" "" "A_92_P019496" "GO:0031072" "heat shock protein binding" 184 2 0.28 "0.0311" 1 "*" "" "" "A_92_P002418;A_92_P030677" "GO:0008375" "acetylglucosaminyltransferase activity" 28 1 0.04 "0.0414" 1 "*" "" "" "A_92_P024307" "GO:0016776" "phosphotransferase activity, phosphate g..." 28 1 0.04 "0.0414" 1 "*" "" "" "A_92_P019496" "GO:0010181" "FMN binding" 35 1 0.05 "0.0515" 1 "" "" "" "A_92_P009352" "GO:0008378" "galactosyltransferase activity" 36 1 0.05 "0.0530" 1 "" "" "" "A_92_P013928" "GO:0005097" "Rab GTPase activator activity" 41 1 0.06 "0.0601" 1 "" "" "" "A_92_P039188" "GO:0005099" "Ras GTPase activator activity" 41 1 0.06 "0.0601" 1 "" "" "" "A_92_P039188" "GO:0004177" "aminopeptidase activity" 45 1 0.07 "0.0658" 1 "" "" "" "A_92_P034803" "GO:0019205" "nucleobase-containing compound kinase ac..." 53 1 0.08 "0.0771" 1 "" "" "" "A_92_P019496" "GO:0008493" "tetracycline transporter activity" 56 1 0.08 "0.0812" 1 "" "" "" "A_92_P010334" "GO:0015307" "drug:hydrogen antiporter activity" 56 1 0.08 "0.0812" 1 "" "" "" "A_92_P010334" "GO:0015520" "tetracycline:hydrogen antiporter activit..." 56 1 0.08 "0.0812" 1 "" "" "" "A_92_P010334" "GO:0042895" "antibiotic transporter activity" 56 1 0.08 "0.0812" 1 "" "" "" "A_92_P010334" "GO:0016758" "transferase activity, transferring hexos..." 329 2 0.5 "0.0874" 1 "" "" "" "A_92_P013928;A_92_P024307" "GO:0015298" "solute:cation antiporter activity" 72 1 0.11 "0.1033" 1 "" "" "" "A_92_P010334" CC_GO.ID "Term" "Annotated" "Significant" "Expected" "classicFisher.p.val" "classicFisher.adj.p.val" "p.val<0.05" "p.val<0.01" "adj.p.val<0.05" "GeneIDs_significant" "GO:0016602" "CCAAT-binding factor complex" 8 1 0.01 "0.014" 1 "*" "" "" "A_92_P007586" "GO:0005634" "nucleus" 1522 6 2.71 "0.034" 1 "*" "" "" "A_92_P007586;A_92_P011352;A_92_P015153;A_92_P015576;A_92_P016260;A_92_P027578" "GO:0005667" "transcription factor complex" 38 1 0.07 "0.066" 1 "" "" "" "A_92_P007586" "GO:0005654" "nucleoplasm" 57 1 0.1 "0.097" 1 "" "" "" "A_92_P007586" "GO:0044451" "nucleoplasm part" 57 1 0.1 "0.097" 1 "" "" "" "A_92_P007586" "GO:0043227" "membrane-bounded organelle" 1994 6 3.56 "0.112" 1 "" "" "" "A_92_P007586;A_92_P011352;A_92_P015153;A_92_P015576;A_92_P016260;A_92_P027578" "GO:0043231" "intracellular membrane-bounded organelle" 1994 6 3.56 "0.112" 1 "" "" "" "A_92_P007586;A_92_P011352;A_92_P015153;A_92_P015576;A_92_P016260;A_92_P027578" "GO:0031981" "nuclear lumen" 79 1 0.14 "0.132" 1 "" "" "" "A_92_P007586" "GO:0043233" "organelle lumen" 92 1 0.16 "0.152" 1 "" "" "" "A_92_P007586" "GO:0070013" "intracellular organelle lumen" 92 1 0.16 "0.152" 1 "" "" "" "A_92_P007586" "GO:0031974" "membrane-enclosed lumen" 100 1 0.18 "0.165" 1 "" "" "" "A_92_P007586" "GO:0043226" "organelle" 2774 7 4.95 "0.181" 1 "" "" "" "A_92_P007586;A_92_P011352;A_92_P011760;A_92_P015153;A_92_P015576;A_92_P016260;A_92_P027578" "GO:0043229" "intracellular organelle" 2774 7 4.95 "0.181" 1 "" "" "" "A_92_P007586;A_92_P011352;A_92_P011760;A_92_P015153;A_92_P015576;A_92_P016260;A_92_P027578" "GO:0044428" "nuclear part" 113 1 0.2 "0.184" 1 "" "" "" "A_92_P007586" "GO:0044424" "intracellular part" 3621 7 6.46 "0.493" 1 "" "" "" "A_92_P007586;A_92_P011352;A_92_P011760;A_92_P015153;A_92_P015576;A_92_P016260;A_92_P027578" "GO:0005840" "ribosome" 479 1 0.85 "0.588" 1 "" "" "" "A_92_P011760" "GO:0005622" "intracellular" 4386 8 7.82 "0.589" 1 "" "" "" "A_92_P007586;A_92_P011352;A_92_P011760;A_92_P015153;A_92_P015576;A_92_P016260;A_92_P027578;A_92_P039188" "GO:0030529" "ribonucleoprotein complex" 528 1 0.94 "0.625" 1 "" "" "" "A_92_P011760" "GO:0005623" "cell" 4572 8 8.15 "0.668" 1 "" "" "" "A_92_P007586;A_92_P011352;A_92_P011760;A_92_P015153;A_92_P015576;A_92_P016260;A_92_P027578;A_92_P039188" "GO:0044464" "cell part" 4572 8 8.15 "0.668" 1 "" "" "" "A_92_P007586;A_92_P011352;A_92_P011760;A_92_P015153;A_92_P015576;A_92_P016260;A_92_P027578;A_92_P039188"