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changeset 1:007baf9662c6 draft default tip

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author nanettec
date Fri, 18 Mar 2016 05:33:29 -0400
parents 7becbd7bf5d5
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files go_enrichment/._.DS_Store go_enrichment/._GO_enrichment.py go_enrichment/._GO_enrichment.xml go_enrichment/._TopGO_pipeline_new.txt go_enrichment/._readme.txt go_enrichment/test-data/._.DS_Store go_enrichment/test-data/input/._.DS_Store go_enrichment/test-data/input/._all_eQTL_lists.txt go_enrichment/test-data/input/._cis_eQTL_lists.txt go_enrichment/test-data/input/._gene_positions_sense_antisense_EST_gDNA.txt go_enrichment/test-data/input/._maize_agilent_reference.map.txt go_enrichment/test-data/input/._trans_eQTL_lists.txt go_enrichment/test-data/output/._.DS_Store go_enrichment/test-data/output/._GO_enrichment_cis go_enrichment/test-data/output/._GO_enrichment_trans go_enrichment/test-data/output/._hotspot_summary.txt go_enrichment/test-data/output/GO_enrichment_cis/._hotspot1_cis_GO_table.txt go_enrichment/test-data/output/GO_enrichment_cis/._hotspot1_cis_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_cis/._hotspot1_cis_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_cis/._hotspot1_cis_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_cis/._hotspot2_cis_GO_table.txt go_enrichment/test-data/output/GO_enrichment_cis/._hotspot2_cis_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_cis/._hotspot2_cis_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_cis/._hotspot2_cis_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_cis/._hotspot3_cis_GO_table.txt go_enrichment/test-data/output/GO_enrichment_cis/._hotspot3_cis_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_cis/._hotspot3_cis_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_cis/._hotspot3_cis_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_cis/._hotspots_cis_GO_tables.txt go_enrichment/test-data/output/GO_enrichment_trans/._hotspot10_trans_GO_table.txt go_enrichment/test-data/output/GO_enrichment_trans/._hotspot10_trans_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot10_trans_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot10_trans_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot11_trans_GO_table.txt go_enrichment/test-data/output/GO_enrichment_trans/._hotspot11_trans_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot11_trans_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot11_trans_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot12_trans_GO_table.txt go_enrichment/test-data/output/GO_enrichment_trans/._hotspot12_trans_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot12_trans_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot12_trans_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot13_trans_GO_table.txt go_enrichment/test-data/output/GO_enrichment_trans/._hotspot13_trans_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot13_trans_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot13_trans_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot14_trans_GO_table.txt go_enrichment/test-data/output/GO_enrichment_trans/._hotspot14_trans_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot14_trans_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot14_trans_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot15_trans_GO_table.txt go_enrichment/test-data/output/GO_enrichment_trans/._hotspot15_trans_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot15_trans_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot15_trans_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot16_trans_GO_table.txt go_enrichment/test-data/output/GO_enrichment_trans/._hotspot16_trans_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot16_trans_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot16_trans_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot17_trans_GO_table.txt go_enrichment/test-data/output/GO_enrichment_trans/._hotspot17_trans_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot17_trans_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot17_trans_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot18_trans_GO_table.txt go_enrichment/test-data/output/GO_enrichment_trans/._hotspot18_trans_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot18_trans_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot18_trans_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot19_trans_GO_table.txt go_enrichment/test-data/output/GO_enrichment_trans/._hotspot19_trans_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot19_trans_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot19_trans_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot1_trans_GO_table.txt go_enrichment/test-data/output/GO_enrichment_trans/._hotspot1_trans_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot1_trans_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot1_trans_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot20_trans_GO_table.txt go_enrichment/test-data/output/GO_enrichment_trans/._hotspot20_trans_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot20_trans_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot20_trans_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot21_trans_GO_table.txt go_enrichment/test-data/output/GO_enrichment_trans/._hotspot21_trans_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot21_trans_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot21_trans_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot2_trans_GO_table.txt go_enrichment/test-data/output/GO_enrichment_trans/._hotspot2_trans_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot2_trans_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot2_trans_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot3_trans_GO_table.txt go_enrichment/test-data/output/GO_enrichment_trans/._hotspot3_trans_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot3_trans_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot3_trans_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot4_trans_GO_table.txt go_enrichment/test-data/output/GO_enrichment_trans/._hotspot4_trans_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot4_trans_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot4_trans_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot5_trans_GO_table.txt 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go_enrichment/test-data/output/GO_enrichment_trans/._hotspot8_trans_GO_table.txt go_enrichment/test-data/output/GO_enrichment_trans/._hotspot8_trans_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot8_trans_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot8_trans_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot9_trans_GO_table.txt go_enrichment/test-data/output/GO_enrichment_trans/._hotspot9_trans_tGO_BP_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot9_trans_tGO_CC_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspot9_trans_tGO_MF_classic_5_all.pdf go_enrichment/test-data/output/GO_enrichment_trans/._hotspots_trans_GO_tables.txt
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