Mercurial > repos > nathandunn > biolinkmonarchinitiative
view bioentity-associations.xml @ 4:49b46f044d48 draft
planemo upload commit 0dbcda86caba8f8fead7cb6fde0ae3e73d398f1e
author | nathandunn |
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date | Mon, 04 Dec 2017 19:35:12 -0500 |
parents | 88e1bd76b069 |
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<tool id="monarch-bioentity-associations" name="Bioentity Associations" version="0.1.0"> <macros> <import>macros.xml</import> </macros> <expand macro="frontmatter" /> <command><![CDATA[ curl --silent -X GET --header 'Accept: application/json' 'https://api.monarchinitiative.org/api/bioentity/$input/associations/?rows=$rows&fetch_objects=true' > $output ]]></command> <inputs> <param name="input" type="text" format="txt" multiple="false" label="Bioentity ID (e.g. ZFIN:ZDB-ALT-010427-8)" /> <param name="rows" type="text" format="txt" multiple="false" value="1000" label="Num Rows"/> </inputs> <expand macro="outputs" /> <tests> <test> <param name="input" value="ZFIN:ZDB-ALT-010427-8"/> <output name="output" file="associations-for-variant.json"/> </test> </tests> <expand macro="citations" /> </tool>