Mercurial > repos > nathandunn > biolinkplanteome
diff bulk-operations.xml @ 1:66ece4fd024f draft default tip
planemo upload commit 20eeb677e99874173440a365f2db04e315e7ebed
| author | nathandunn |
|---|---|
| date | Wed, 28 Jun 2017 10:27:08 -0400 |
| parents | 028a3ffc17b4 |
| children |
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--- a/bulk-operations.xml Fri Jun 23 15:04:12 2017 -0400 +++ b/bulk-operations.xml Wed Jun 28 10:27:08 2017 -0400 @@ -4,17 +4,17 @@ </macros> <expand macro="frontmatter" /> <command><![CDATA[ -curl --silent -X GET --header 'Accept: application/json' 'http://biolink.planteome.org/apiapi/mart/$association/$object_category/$taxon?rows=$rows&fetch_objects=true' > $output +curl --silent -X GET --header 'Accept: application/json' 'http://biolink.planteome.org/api/mart/$association/$object_category/$taxon?rows=$rows&fetch_objects=true' > $output ]]></command> <inputs> - <param name="taxon" type="text" format="txt" multiple="false" label="Taxon (e.g. NCBITaxon:9606)"/> - <param name="object_category" type="text" format="txt" multiple="false" label="Object Category (e.g. phenotype, disease)"/> + <param name="taxon" type="text" format="txt" multiple="false" label="Taxon (e.g. NCBITaxon:4530)"/> + <param name="object_category" type="text" format="txt" multiple="false" label="Object Category (e.g. phenotype)"/> <param name="association" type="select" multiple="false" display="radio" label="Type"> <option value="gene">Gene</option> - <option value="disease">Disease</option> - <option value="case">Case</option> + <!--<option value="disease">Disease</option>--> + <!--<option value="case">Case</option>--> </param> - <param name="rows" type="text" format="txt" multiple="false" value="1000" label="Num Rows"/> + <param name="rows" type="text" format="txt" multiple="false" value="10" label="Num Rows"/> </inputs> <expand macro="outputs" /> <tests>