Mercurial > repos > nedias > blast_tool

comparison blast_entry.py @ 4:0145fdbdcf90 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author nedias
date Wed, 12 Oct 2016 18:16:53 -0400
parents 0c471588f014
children
comparison
equal deleted inserted replaced
3:14894a8de3a7 4:0145fdbdcf90
24 metavar="FILE") 24 metavar="FILE")
25 parser.add_option("-o", "--output", dest="output", 25 parser.add_option("-o", "--output", dest="output",
26 default=None, 26 default=None,
27 help="Output of Blast result in xml form", 27 help="Output of Blast result in xml form",
28 metavar="FILE") 28 metavar="FILE")
29 parser.add_option("-v", "--version", dest="version",
30 default=False, action="store_true",
31 help="Show version and quit")
29 parser.add_option("-f", "--format", dest="format", 32 parser.add_option("-f", "--format", dest="format",
30 default="fasta", 33 default="fasta",
31 help="Set the format of input file") 34 help="Set the format of input file")
32 parser.add_option("-p", "--program", dest="program", 35 parser.add_option("-p", "--program", dest="program",
33 default="blastp", 36 default="blastp",