Mercurial > repos > ngsplot > ngsplot
view ngsplot_galaxytoolshed_v1.0/tool_dependencies.xml @ 2:b2d5006b82b8 draft
Uploaded
author | ngsplot |
---|---|
date | Wed, 18 Mar 2015 15:43:54 -0400 |
parents | |
children | 8d5e4622dc60 |
line wrap: on
line source
<?xml version="1.0"?> <tool_dependency> <package name="ngsplot" version="2.47.1"> <install version="1.0"> <actions> <action type="shell_command">tar -xzvf ngsplot-2.47.1.tar.gz</action> <action type="move_directory_files"> <source_directory>ngsplot</source_directory> <destination_directory>$INSTALL_DIR/ngsplot</destination_directory> </action> <action type="set_environment"> <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/ngsplot/bin</environment_variable> </action> <action type="set_environment"> <environment_variable name="NGSPLOT" action="prepend_to">$INSTALL_DIR/ngsplot</environment_variable> </action> </actions> </install> <readme> This installation of ngsplot assumes that R v3.0+ has already been installed on your system, including R packages doMC and caTools, as well as bioconductor packages BSgenome, Rsamtools, and ShortRead. For more information on how to install these additional R packages, see https://code.google.com/p/ngsplot/. </readme> </package> </tool_dependency>