Mercurial > repos > nick > allele_counts

diff allele-counts.xml @ 11:cf2af5c3118c draft default tip

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"planemo upload for repository https://github.com/galaxyproject/dunovo commit ac9577f0047ad984b307fe2c4b40e2eb45a0e6e2"
author nick
date Fri, 03 Apr 2020 16:05:04 -0400
parents 7f19e8c03358
children
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--- a/allele-counts.xml	Tue Mar 31 20:24:27 2020 -0400
+++ b/allele-counts.xml	Fri Apr 03 16:05:04 2020 -0400
@@ -1,10 +1,10 @@
-<tool id="allele_counts_1" version="1.3" name="Variant Annotator">
+<tool id="allele_counts_1" version="1.3.2" name="Variant Annotator">
   <description> process variant counts</description>
   <stdio>
     <exit_code range="1:" level="fatal" />
     <exit_code range=":-1" level="fatal" />
   </stdio>
-  <command>allele-counts.py -i '$input' -o '$output' -f $freq -c $covg $header $stranded $nofilt
+  <command>python3 '$__tool_directory__/allele-counts.py' -i '$input' -o '$output' -f $freq -c $covg $header $stranded $nofilt
   #if $seed:
     -r '$seed'
   #end if