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comparison correct_barcodes.xml @ 1:ea832c221ec9 draft

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planemo upload for repository https://github.com/galaxyproject/dunovo commit b'd25c300643f4f204b4a9445b8eac071b2d127520\n'-dirty
author nick
date Fri, 24 Feb 2017 03:18:01 -0500
parents f875256c722e
children a9cb6fb9ea94
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0:f875256c722e 1:ea832c221ec9
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool id="correct_barcodes" name="Du Novo: Correct barcodes" version="0.7"> 2 <tool id="correct_barcodes" name="Du Novo: Correct barcodes" version="0.7">
3 <description>of duplex sequencing reads</description> 3 <description>of duplex sequencing reads</description>
4 <requirements> 4 <requirements>
5 <requirement type="package" version="2.1.0">bowtie2</requirement> 5 <requirement type="package" version="2.2.5">bowtie2</requirement>
6 <requirement type="package" version="0.1.18">samtools</requirement> 6 <requirement type="package" version="0.1.18">samtools</requirement>
7 <requirement type="package" version="1.9">networkx</requirement> 7 <requirement type="package" version="1.9">networkx</requirement>
8 <requirement type="package" version="0.7">dunovo</requirement> 8 <requirement type="package" version="0.7.1">dunovo</requirement>
9 <!-- TODO: require Python 2.7 --> 9 <!-- TODO: require Python 2.7 -->
10 </requirements> 10 </requirements>
11 <command detect_errors="exit_code">correct-barcodes.sh -d $dist -m $mapq -p $pos '$input' &gt; '$output' 11 <command detect_errors="exit_code">correct-barcodes.sh -d $dist -m $mapq -p $pos '$input' &gt; '$output'
12 </command> 12 </command>
13 <inputs> 13 <inputs>