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comparison tool_dependencies.xml @ 0:f875256c722e draft

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planemo upload for repository https://github.com/galaxyproject/dunovo commit b'd00f828e5768c5fac3e382b9d12f34bbdf9019e9\n'-dirty
author nick
date Sat, 18 Feb 2017 05:58:44 -0500
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children ea832c221ec9
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-1:000000000000 0:f875256c722e
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="bowtie2" version="2.1.0">
4 <repository changeset_revision="017a00c265f1" name="package_bowtie2_2_1_0" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
5 </package>
6 <package name="samtools" version="0.1.18">
7 <repository changeset_revision="1409782220c9" name="package_samtools_0_1_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
8 </package>
9 <package name="mafft" version="7.221">
10 <repository changeset_revision="15974dd17515" name="mafft" owner="rnateam" toolshed="https://toolshed.g2.bx.psu.edu" />
11 </package>
12 <package name="networkx" version="1.9">
13 <repository changeset_revision="83df321ad85e" name="package_networkx_1_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
14 </package>
15 <package name="dunovo" version="0.7">
16 <install version="1.0">
17 <actions>
18 <action sha256sum="9d5092490772c43c73f7c85ea883d6a18f5df030fb4eac7310ac40694495b7c8" type="download_by_url">https://github.com/galaxyproject/dunovo/archive/v0.7.tar.gz</action>
19 <action type="shell_command">make</action>
20 <action type="move_directory_files">
21 <source_directory>.</source_directory>
22 <destination_directory>$INSTALL_DIR</destination_directory>
23 </action>
24 <action type="set_environment">
25 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
26 </action>
27 </actions>
28 </install>
29 </package>
30 </tool_dependency>