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diff dunovo.xml @ 7:e7b88ffb8294 draft

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planemo upload for repository https://github.com/galaxyproject/dunovo commit b'9101e88acb2d3dc022c47e0663fec1f6b9fa58a5\n'-dirty
author nick
date Fri, 10 Nov 2017 09:33:29 -0500
parents 23f5d9316694
children 658eefb99fd7
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--- a/dunovo.xml	Thu Nov 02 16:24:48 2017 -0400
+++ b/dunovo.xml	Fri Nov 10 09:33:29 2017 -0500
@@ -1,13 +1,13 @@
 <?xml version="1.0"?>
-<tool id="dunovo" name="Du Novo: Make consensus reads" version="2.0.8">
+<tool id="dunovo" name="Du Novo: Make consensus reads" version="2.0.9">
   <description>from duplex sequencing alignments</description>
   <requirements>
-    <requirement type="package" version="2.0.8">dunovo</requirement>
+    <requirement type="package" version="2.0.9">dunovo</requirement>
     <!-- TODO: require Python 2.7 -->
   </requirements>
-  <version_command>dunovo.py --version</version_command>
+  <version_command>make-consensi.py --version</version_command>
   <command detect_errors="exit_code">
-    dunovo.py --galaxy $phone --processes \${GALAXY_SLOTS:-1} --min-reads $min_reads --qual $qual_thres --qual-format $qual_format --cons-thres $cons_thres --min-cons-reads $min_cons_reads '$input' --dcs1 '$dcs1' --dcs2 '$dcs2'
+    make-consensi.py --galaxy $phone --processes \${GALAXY_SLOTS:-1} --min-reads $min_reads --qual $qual_thres --qual-format $qual_format --cons-thres $cons_thres --min-cons-reads $min_cons_reads '$input' --dcs1 '$dcs1' --dcs2 '$dcs2'
     #if $keep_sscs:
       --sscs1 '$sscs1' --sscs2 '$sscs2'
     #end if