Mercurial > repos > nick > dunovo

view tool_dependencies.xml @ 0:f875256c722e draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/dunovo commit b'd00f828e5768c5fac3e382b9d12f34bbdf9019e9\n'-dirty
author nick
date Sat, 18 Feb 2017 05:58:44 -0500
parents
children ea832c221ec9
line wrap: on
line source

<?xml version="1.0"?>
<tool_dependency>
  <package name="bowtie2" version="2.1.0">
    <repository changeset_revision="017a00c265f1" name="package_bowtie2_2_1_0" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
  </package>
  <package name="samtools" version="0.1.18">
    <repository changeset_revision="1409782220c9" name="package_samtools_0_1_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
  </package>
  <package name="mafft" version="7.221">
    <repository changeset_revision="15974dd17515" name="mafft" owner="rnateam" toolshed="https://toolshed.g2.bx.psu.edu" />
  </package>
  <package name="networkx" version="1.9">
    <repository changeset_revision="83df321ad85e" name="package_networkx_1_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
  </package>
  <package name="dunovo" version="0.7">
    <install version="1.0">
      <actions>
        <action sha256sum="9d5092490772c43c73f7c85ea883d6a18f5df030fb4eac7310ac40694495b7c8" type="download_by_url">https://github.com/galaxyproject/dunovo/archive/v0.7.tar.gz</action>
        <action type="shell_command">make</action>
        <action type="move_directory_files">
          <source_directory>.</source_directory>
          <destination_directory>$INSTALL_DIR</destination_directory>
        </action>
        <action type="set_environment">
          <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
        </action>
      </actions>
    </install>
  </package>
</tool_dependency>