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comparison tool_dependencies.xml @ 6:9a0bee12b583 draft default tip

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planemo upload for repository https://github.com/galaxyproject/dunovo commit b'9fbe4b8871038d2945fa4b9ee0b5f89cf4e4f494\n'-dirty
author nick
date Mon, 06 Feb 2017 23:39:11 -0500
parents 4bc49a5769ee
children
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5:4bc49a5769ee 6:9a0bee12b583
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="bowtie2" version="2.1.0">
4 <repository changeset_revision="017a00c265f1" name="package_bowtie2_2_1_0" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
5 </package>
6 <package name="samtools" version="0.1.18">
7 <repository changeset_revision="1409782220c9" name="package_samtools_0_1_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
8 </package>
3 <package name="mafft" version="7.221"> 9 <package name="mafft" version="7.221">
4 <repository changeset_revision="15974dd17515" name="mafft" owner="rnateam" toolshed="https://toolshed.g2.bx.psu.edu" /> 10 <repository changeset_revision="15974dd17515" name="mafft" owner="rnateam" toolshed="https://toolshed.g2.bx.psu.edu" />
5 </package> 11 </package>
6 <package name="duplex" version="0.5"> 12 <package name="networkx" version="1.9">
13 <repository changeset_revision="83df321ad85e" name="package_networkx_1_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
14 </package>
15 <package name="duplex" version="0.6">
7 <install version="1.0"> 16 <install version="1.0">
8 <actions> 17 <actions>
9 <action type="download_by_url">https://github.com/galaxyproject/dunovo/archive/v0.5.tar.gz</action> 18 <action sha256sum="a3cc378c22fcfc3bcaa11129f27f61bab5ff51cc9185320d53ece273b56e6214" type="download_by_url">https://github.com/galaxyproject/dunovo/archive/v0.6.tar.gz</action>
10 <action type="shell_command">make</action> 19 <action type="shell_command">make</action>
11 <action type="move_directory_files"> 20 <action type="move_directory_files">
12 <source_directory>.</source_directory> 21 <source_directory>.</source_directory>
13 <destination_directory>$INSTALL_DIR</destination_directory> 22 <destination_directory>$INSTALL_DIR</destination_directory>
14 </action> 23 </action>