Mercurial > repos > nick > duplex
comparison align_families.xml @ 3:aedbdf8ce1af draft
planemo upload commit 670b3282d2c120882b956ad617e61369467fb0fe
author | nick |
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date | Tue, 08 Dec 2015 08:59:27 -0500 |
parents | ba2a53b970ca |
children | 7f513b9b1b1e |
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2:ba2a53b970ca | 3:aedbdf8ce1af |
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4 <requirements> | 4 <requirements> |
5 <requirement type="package" version="7.221">mafft</requirement> | 5 <requirement type="package" version="7.221">mafft</requirement> |
6 <requirement type="package" version="0.2">duplex</requirement> | 6 <requirement type="package" version="0.2">duplex</requirement> |
7 <requirement type="set_environment">DUPLEX_DIR</requirement> | 7 <requirement type="set_environment">DUPLEX_DIR</requirement> |
8 </requirements> | 8 </requirements> |
9 <command detect_errors="exit_code">python \$DUPLEX_DIR/align_families.py $input > $output | 9 <command detect_errors="exit_code">python \$DUPLEX_DIR/align_families.py -p \${GALAXY_SLOTS:-1} $input > $output |
10 </command> | 10 </command> |
11 <inputs> | 11 <inputs> |
12 <param name="input" type="data" format="tabular" label="Input reads" help="with barcodes, grouped by family"/> | 12 <param name="input" type="data" format="tabular" label="Input reads" help="with barcodes, grouped by family"/> |
13 </inputs> | 13 </inputs> |
14 <outputs> | 14 <outputs> |