Mercurial > repos > nikos > bigwig_to_wig

comparison tool_dependencies.xml @ 2:bce77c02cc5f draft

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Fixed tool dependency errors
author nikos
date Tue, 05 Aug 2014 09:03:05 -0400
parents 99dc4bdb1d35
children
comparison
equal deleted inserted replaced
1:561c9a746a81 2:bce77c02cc5f
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="bigWigSummary"> 3 <package name="bigWigSummary" version="1.0">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions_group> 5 <actions>
6 <actions os="linux" architecture="x86_64"> 6 <action type="download_by_url">http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/bigWigSummary</action>
7 <action type="download_binary"><url_template>http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/bigWigSummary</url_template></action> 7 <action type="move_directory_files">
8 <action type="move_directory_files"> 8 <source_directory>.</source_directory>
9 <source_directory>.</source_directory> 9 <destination_directory>$INSTALL_DIR</destination_directory>
10 <destination_directory>$INSTALL_DIR</destination_directory> 10 </action>
11 </action> 11 <action type="chmod"><file mode="755">$INSTALL_DIR/bigWigSummary</file></action>
12 </actions>
13
14
15 <action type="set_environment"> 12 <action type="set_environment">
16 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> 13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
17 </action> 14 </action>
18 </actions_group> 15 </actions>
19 </install> 16 </install>
20 <readme> 17 <readme>
21 </readme> 18 </readme>
22 </package> 19 </package>
23 <package name="bigWigInfo"> 20 <package name="bigWigInfo" version="1.0">
24 <install version="1.0"> 21 <install version="1.0">
25 <actions_group> 22 <actions>
26 <actions os="linux" architecture="x86_64"> 23 <action type="download_by_url">http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/bigWigInfo</action>
27 <action type="download_binary"><url_template>http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/bigWigInfo</url_template></action> 24 <action type="move_directory_files">
28 <action type="move_directory_files"> 25 <source_directory>.</source_directory>
29 <source_directory>.</source_directory> 26 <destination_directory>$INSTALL_DIR</destination_directory>
30 <destination_directory>$INSTALL_DIR</destination_directory> 27 </action>
31 </action> 28 <action type="chmod"><file mode="755">$INSTALL_DIR/bigWigInfo</file></action>
32 </actions>
33
34
35 <action type="set_environment"> 29 <action type="set_environment">
36 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> 30 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
37 </action> 31 </action>
38 </actions_group> 32 </actions>
39 </install> 33 </install>
40 <readme> 34 <readme>
41 </readme> 35 </readme>
42 </package> 36 </package>
43 </tool_dependency> 37 </tool_dependency>