comparison tool_dependencies.xml @ 23:1547a2918126 draft

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author nilesh
date Wed, 26 Jun 2013 21:11:19 -0400
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22:458c8de5e552 23:1547a2918126
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <set_environment version="1.0">
4 <environment_variable action="set_to" name="FQVAL_SCRIPT_PATH">$REPOSITORY_INSTALL_DIR</environment_variable>
5 </set_environment>
6 <package name="fastq_validator" version="1.0.0">
7 <install version="1.0">
8 <actions>
9 <action type="download_file">http://genome.sph.umich.edu/w/images/2/20/FastQValidatorLibStatGen.0.1.1a.tgz</action>
10 <action type="shell_command">tar xvf FastQValidatorLibStatGen.0.1.1a.tgz</action>
11 <action type="shell_command">cd fastQValidator_0.1.1a</action>
12 <action type="shell command">make all</action>
13 <action type="set_environment">
14 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
15 </action>
16 </actions>
17 </install>
18 <readme>
19 View the FastQ Validator overview at http://genome.sph.umich.edu/wiki/FastQValidator.
20 </readme>
21 <repository changeset_revision="458c8de5e552" name="fastq_validator" owner="nilesh" toolshed="http://toolshed.g2.bx.psu.edu" />
22 </package>
23 </tool_dependency>