Mercurial > repos > nilesh > fastq_validator

comparison tool_dependencies.xml @ 36:ed284a252b85 draft

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author nilesh
date Thu, 27 Jun 2013 11:33:17 -0400
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35:a9d044f6412b 36:ed284a252b85
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="libStatGen" version="1.0.0">
4 <install version="1.0">
5 <actions>
6 <action type="download_file">http://genome.sph.umich.edu/w/images/2/20/FastQValidatorLibStatGen.0.1.1a.tgz</action>
7 <action type="shell_command">tar xvf FastQValidatorLibStatGen.0.1.1a.tgz</action>
8 <action type="move_directory_files">
9 <source_directory>fastQValidator_0.1.1a</source_directory>
10 <destination_directory>$INSTALL_DIR</destination_directory>
11 </action>
12 <action type="shell_command">make all</action>
13 <action type="set_environment">
14 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
15 </action>
16 </actions>
17 </install>
18 <readme>
19 View the FastQ Validator overview at http://genome.sph.umich.edu/wiki/FastQValidator.
20 </readme>
21 <repository changeset_revision="a9d044f6412b" name="fastq_validator" owner="nilesh" toolshed="http://toolshed.g2.bx.psu.edu" />
22 </package>
23 <!-- <package name="fastq_validator" version="1.0.0">
24 <install version="1.0">
25 <actions>
26 <action type="download_file">http://genome.sph.umich.edu/w/images/2/20/FastQValidatorLibStatGen.0.1.1a.tgz</action>
27 <action type="shell_command">tar xvf FastQValidatorLibStatGen.0.1.1a.tgz</action>
28 <action type="shell command">make all</action>
29 <action type="set_environment">
30 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
31 </action>
32 </actions>
33 </install>
34 <readme>
35 View the FastQ Validator overview at http://genome.sph.umich.edu/wiki/FastQValidator.
36 </readme>
37 <repository name="fastq_validator" owner="nilesh" toolshed="http://toolshed.g2.bx.psu.edu" />
38 </package> -->
39 </tool_dependency>