Mercurial > repos > nilesh > rseqc

comparison infer_experiment.xml @ 59:dbedfc5f5a3c draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rseqc commit 247059e2527b66f1dbecf1e61496daef921040c3"
author iuc
date Sat, 18 Dec 2021 19:41:19 +0000
parents 5873cd7afb67
children 1421603cc95b
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58:1a052c827e88 59:dbedfc5f5a3c
1 <tool id="rseqc_infer_experiment" name="Infer Experiment" version="@WRAPPER_VERSION@.1"> 1 <tool id="rseqc_infer_experiment" name="Infer Experiment" version="@TOOL_VERSION@.1">
2 <description>speculates how RNA-seq were configured</description> 2 <description>speculates how RNA-seq were configured</description>
3 3 <expand macro="bio_tools"/>
4 <macros> 4 <macros>
5 <import>rseqc_macros.xml</import> 5 <import>rseqc_macros.xml</import>
6 </macros> 6 </macros>
7 7
8 <expand macro="requirements" /> 8 <expand macro="requirements" />
31 </outputs> 31 </outputs>
32 32
33 <tests> 33 <tests>
34 <test> 34 <test>
35 <param name="input" value="pairend_strandspecific_51mer_hg19_chr1_1-100000.bam"/> 35 <param name="input" value="pairend_strandspecific_51mer_hg19_chr1_1-100000.bam"/>
36 <param name="refgene" value="hg19_RefSeq_chr1_1-100000.bed"/> 36 <param name="refgene" value="hg19_RefSeq_chr1_1-100000.bed" ftype="bed12"/>
37 <output name="output" file="output.infer_experiment.txt"/> 37 <output name="output" file="output.infer_experiment.txt"/>
38 </test> 38 </test>
39 </tests> 39 </tests>
40 40
41 <help><![CDATA[ 41 <help><![CDATA[