Mercurial > repos > nilesh > rseqc
comparison insertion_profile.xml @ 59:dbedfc5f5a3c draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rseqc commit 247059e2527b66f1dbecf1e61496daef921040c3"
author | iuc |
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date | Sat, 18 Dec 2021 19:41:19 +0000 |
parents | 09846d5169fa |
children | 1421603cc95b |
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58:1a052c827e88 | 59:dbedfc5f5a3c |
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1 <tool id="rseqc_insertion_profile" name="Insertion Profile" version="@WRAPPER_VERSION@"> | 1 <tool id="rseqc_insertion_profile" name="Insertion Profile" version="@TOOL_VERSION@"> |
2 <description> | 2 <description> |
3 calculates the distribution of inserted nucleotides across reads | 3 calculates the distribution of inserted nucleotides across reads |
4 </description> | 4 </description> |
5 | 5 <expand macro="bio_tools"/> |
6 <macros> | 6 <macros> |
7 <import>rseqc_macros.xml</import> | 7 <import>rseqc_macros.xml</import> |
8 </macros> | 8 </macros> |
9 | 9 |
10 <expand macro="requirements" /> | 10 <expand macro="requirements" /> |
35 <test> | 35 <test> |
36 <param name="input" value="pairend_strandspecific_51mer_hg19_chr1_1-100000.bam" /> | 36 <param name="input" value="pairend_strandspecific_51mer_hg19_chr1_1-100000.bam" /> |
37 <param name="rscript_output" value="true" /> | 37 <param name="rscript_output" value="true" /> |
38 <output name="outputpdf" file="output.insertion_profile.pdf" compare="sim_size" /> | 38 <output name="outputpdf" file="output.insertion_profile.pdf" compare="sim_size" /> |
39 <output name="outputxls" file="output.insertion_profile.xls" /> | 39 <output name="outputxls" file="output.insertion_profile.xls" /> |
40 <output name="outputr" file="output.insertion_profile.r" /> | 40 <output name="outputr" file="output.insertion_profile_r" /> |
41 </test> | 41 </test> |
42 </tests> | 42 </tests> |
43 | 43 |
44 <help><![CDATA[ | 44 <help><![CDATA[ |
45 insertion_profile.py | 45 insertion_profile.py |