Mercurial > repos > nilesh > rseqc

comparison read_distribution.xml @ 59:dbedfc5f5a3c draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rseqc commit 247059e2527b66f1dbecf1e61496daef921040c3"
author iuc
date Sat, 18 Dec 2021 19:41:19 +0000
parents 5873cd7afb67
children 1421603cc95b
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58:1a052c827e88 59:dbedfc5f5a3c
1 <tool id="rseqc_read_distribution" name="Read Distribution" version="@WRAPPER_VERSION@.1"> 1 <tool id="rseqc_read_distribution" name="Read Distribution" version="@TOOL_VERSION@.1">
2 <description>calculates how mapped reads were distributed over genome feature</description> 2 <description>calculates how mapped reads were distributed over genome feature</description>
3 3 <expand macro="bio_tools"/>
4 <macros> 4 <macros>
5 <import>rseqc_macros.xml</import> 5 <import>rseqc_macros.xml</import>
6 </macros> 6 </macros>
7 7
8 <expand macro="requirements" /> 8 <expand macro="requirements" />
26 </outputs> 26 </outputs>
27 27
28 <tests> 28 <tests>
29 <test> 29 <test>
30 <param name="input" value="pairend_strandspecific_51mer_hg19_chr1_1-100000.bam"/> 30 <param name="input" value="pairend_strandspecific_51mer_hg19_chr1_1-100000.bam"/>
31 <param name="refgene" value="hg19_RefSeq_chr1_1-100000.bed"/> 31 <param name="refgene" value="hg19_RefSeq_chr1_1-100000.bed" ftype="bed12"/>
32 <output name="output" file="output.read_distribution.txt"/> 32 <output name="output" file="output.read_distribution.txt"/>
33 </test> 33 </test>
34 </tests> 34 </tests>
35 35
36 <help><![CDATA[ 36 <help><![CDATA[