diff README.txt @ 48:2e6190c29c54 draft

Upload tar.gz again - toolshed removed all files (grrr...)
author lparsons
date Tue, 21 Apr 2015 10:27:06 -0400
parents a447651be8ee
children f242ee103277
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/README.txt	Tue Apr 21 10:27:06 2015 -0400
@@ -0,0 +1,24 @@
+== RSeQC Galaxy Wrapper ==
+
+This is a Galaxy wrapper for the RSeQC RNA-Seq QC package.
+
+** Installation **
+
+Installation from a tool shed provides the necessary tool dependencies, R, numpy, and RSeQC.
+
+Otherwise, make sure that R and the RSeQC scripts are in the path and run under the Galaxy environment.
+Move the xml files to a subdirectory of your tools directory and add lines in tool_conf.xml to point to them.
+Restart the Galaxy server.
+
+Requires Python 2.7
+
+** Attribution **
+
+The RSeQC package and associated documentation can be found at: http://rseqc.sourceforge.net/
+
+The galaxy wrapper code was written by 
+    Nilesh Kavthekar, School of Engineering and Applied Sciences, University of Pennsylvania, Class of 2016
+Modified by 
+    Lance Parsons, Lewis-Sigler Institute for Integrative Genomics, Princeton University,
+    Bjorn Gruning, University of Freiburg, bjoern.gruening@gmail.com
+The development of the wrapper code is housed on BitBucket at: https://bitbucket.org/lance_parsons/rseqc_galaxy_wrapper