Mercurial > repos > nilesh > rseqc
diff read_duplication.xml @ 62:473382134e56 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rseqc commit ccb6f7edba5492f4750ef8a59c4f91eb67fdbbec
| author | iuc |
|---|---|
| date | Wed, 22 Feb 2023 15:06:01 +0000 |
| parents | 5968573462fa |
| children | 27e16a30667a |
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--- a/read_duplication.xml Sat Dec 10 11:23:05 2022 +0000 +++ b/read_duplication.xml Wed Feb 22 15:06:01 2023 +0000 @@ -26,8 +26,8 @@ <outputs> <expand macro="pdf_output_data" filename="output.DupRate_plot.pdf" label="${tool.name} on ${on_string}: plot (PDF)"/> - <data format="xls" name="outputxls" from_work_dir="output.pos.DupRate.xls" label="${tool.name} on ${on_string}: positon (XLS)"/> - <data format="xls" name="outputseqxls" from_work_dir="output.seq.DupRate.xls" label="${tool.name} on ${on_string}: sequences (XLS)"/> + <data format="tabular" name="outputxls" from_work_dir="output.pos.DupRate.xls" label="${tool.name} on ${on_string}: positon"/> + <data format="tabular" name="outputseqxls" from_work_dir="output.seq.DupRate.xls" label="${tool.name} on ${on_string}: sequences"/> <expand macro="rscript_output_data" filename="output.DupRate_plot.r" label="${tool.name} on ${on_string}: Rscript"/> </outputs> @@ -35,8 +35,8 @@ <test> <param name="input" value="pairend_strandspecific_51mer_hg19_chr1_1-100000.bam" /> <param name="rscript_output" value="true" /> - <output name="outputxls" file="output.pos.DupRate.xls" /> - <output name="outputseqxls" file="output.seq.DupRate.xls" /> + <output name="outputxls" file="output.pos.DupRate.xls" ftype="tabular"/> + <output name="outputseqxls" file="output.seq.DupRate.xls" ftype="tabular"/> <output name="outputr" file="output.DupRate_plot_r" /> <output name="outputpdf" file="output.DupRate_plot.pdf" compare="sim_size" /> </test>