Mercurial > repos > nilesh > rseqc
diff read_duplication.xml @ 61:5968573462fa draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rseqc commit 8a91236cee4d408ae2b53a3e9b6daebc332d631a
| author | iuc |
|---|---|
| date | Sat, 10 Dec 2022 11:23:05 +0000 |
| parents | 1421603cc95b |
| children | 473382134e56 |
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--- a/read_duplication.xml Sat Nov 26 15:19:14 2022 +0000 +++ b/read_duplication.xml Sat Dec 10 11:23:05 2022 +0000 @@ -1,9 +1,9 @@ <tool id="rseqc_read_duplication" name="Read Duplication" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@GALAXY_VERSION@"> <description>determines reads duplication rate with sequence-based and mapping-based strategies</description> - <expand macro="bio_tools"/> <macros> <import>rseqc_macros.xml</import> </macros> + <expand macro="bio_tools"/> <expand macro="requirements" /> @@ -25,10 +25,10 @@ </inputs> <outputs> - <expand macro="pdf_output_data" filename="output.DupRate_plot.pdf" /> - <data format="xls" name="outputxls" from_work_dir="output.pos.DupRate.xls" label="${tool.name} on ${on_string} (Position xls)"/> - <data format="xls" name="outputseqxls" from_work_dir="output.seq.DupRate.xls" label="${tool.name} on ${on_string} (Sequence xls)"/> - <expand macro="rscript_output_data" filename="output.DupRate_plot.r" /> + <expand macro="pdf_output_data" filename="output.DupRate_plot.pdf" label="${tool.name} on ${on_string}: plot (PDF)"/> + <data format="xls" name="outputxls" from_work_dir="output.pos.DupRate.xls" label="${tool.name} on ${on_string}: positon (XLS)"/> + <data format="xls" name="outputseqxls" from_work_dir="output.seq.DupRate.xls" label="${tool.name} on ${on_string}: sequences (XLS)"/> + <expand macro="rscript_output_data" filename="output.DupRate_plot.r" label="${tool.name} on ${on_string}: Rscript"/> </outputs> <tests>