Mercurial > repos > nilesh > rseqc
diff test-data/bamstats.txt @ 49:6b33e31bda10 draft
Uploaded tar based on https://github.com/lparsons/galaxy_tools/tree/master/tools/rseqc 1a3c419bc0ded7c40cb2bc3e7c87bfb01ddfeba2
| author | lparsons |
|---|---|
| date | Thu, 16 Jul 2015 17:43:43 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/bamstats.txt Thu Jul 16 17:43:43 2015 -0400 @@ -0,0 +1,23 @@ +Load BAM file ... Done + +#================================================== +#All numbers are READ count +#================================================== + +Total records: 40 + +QC failed: 0 +Optical/PCR duplicate: 0 +Non primary hits 0 +Unmapped reads: 0 +mapq < mapq_cut (non-unique): 0 + +mapq >= mapq_cut (unique): 40 +Read-1: 20 +Read-2: 20 +Reads map to '+': 20 +Reads map to '-': 20 +Non-splice reads: 36 +Splice reads: 4 +Reads mapped in proper pairs: 39 +Proper-paired reads map to different chrom:0