Mercurial > repos > nilesh > rseqc
diff test-data/output.saturation.r @ 49:6b33e31bda10 draft
Uploaded tar based on https://github.com/lparsons/galaxy_tools/tree/master/tools/rseqc 1a3c419bc0ded7c40cb2bc3e7c87bfb01ddfeba2
author | lparsons |
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date | Thu, 16 Jul 2015 17:43:43 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/output.saturation.r Thu Jul 16 17:43:43 2015 -0400 @@ -0,0 +1,87 @@ +pdf('output.saturation.pdf') +par(mfrow=c(2,2)) +name=c(5,10,15,20,25,30,35,40,45,50,55,60,65,70,75,80,85,90,95) +S5=c() +S10=c() +S15=c() +S20=c() +S25=c() +S30=c() +S35=c() +S40=c() +S45=c() +S50=c() +S55=c() +S60=c() +S65=c() +S70=c() +S75=c() +S80=c() +S85=c() +S90=c() +S95=c() +boxplot(100*S5,100*S10,100*S15,100*S20,100*S25,100*S30,100*S35,100*S40,100*S45,100*S50,100*S55,100*S60,100*S65,100*S70,100*S75,100*S80,100*S85,100*S90,100*S95,names=name,outline=F,ylab='Percent Relative Error',main='Q1',xlab='Resampling percentage') +name=c(5,10,15,20,25,30,35,40,45,50,55,60,65,70,75,80,85,90,95) +S5=c(1.0) +S10=c(1.0) +S15=c(1.0) +S20=c(1.0) +S25=c(1.0) +S30=c(1.0) +S35=c(1.0) +S40=c(1.0) +S45=c(0.259259259259) +S50=c(0.333333333334) +S55=c(0.39393939394) +S60=c(0.444444444444) +S65=c(0.0256410256403) +S70=c(0.0476190476199) +S75=c(0.111111111112) +S80=c(0.166666666666) +S85=c(0.21568627451) +S90=c(0.111111111112) +S95=c(0.0526315789469) +boxplot(100*S5,100*S10,100*S15,100*S20,100*S25,100*S30,100*S35,100*S40,100*S45,100*S50,100*S55,100*S60,100*S65,100*S70,100*S75,100*S80,100*S85,100*S90,100*S95,names=name,outline=F,ylab='Percent Relative Error',main='Q2',xlab='Resampling percentage') +name=c(5,10,15,20,25,30,35,40,45,50,55,60,65,70,75,80,85,90,95) +S5=c() +S10=c() +S15=c() +S20=c() +S25=c() +S30=c() +S35=c() +S40=c() +S45=c() +S50=c() +S55=c() +S60=c() +S65=c() +S70=c() +S75=c() +S80=c() +S85=c() +S90=c() +S95=c() +boxplot(100*S5,100*S10,100*S15,100*S20,100*S25,100*S30,100*S35,100*S40,100*S45,100*S50,100*S55,100*S60,100*S65,100*S70,100*S75,100*S80,100*S85,100*S90,100*S95,names=name,outline=F,ylab='Percent Relative Error',main='Q3',xlab='Resampling percentage') +name=c(5,10,15,20,25,30,35,40,45,50,55,60,65,70,75,80,85,90,95) +S5=c(4.00000000001) +S10=c(1.5) +S15=c(0.666666666666) +S20=c(1.5) +S25=c(1.00000000001) +S30=c(0.666666666666) +S35=c(0.428571428571) +S40=c(0.25) +S45=c(0.111111111111) +S50=c(0.0) +S55=c(0.09090909091) +S60=c(0.25) +S65=c(0.153846153846) +S70=c(0.0714285714295) +S75=c(0.0) +S80=c(0.0624999999991) +S85=c(0.117647058824) +S90=c(0.111111111111) +S95=c(0.0526315789465) +boxplot(100*S5,100*S10,100*S15,100*S20,100*S25,100*S30,100*S35,100*S40,100*S45,100*S50,100*S55,100*S60,100*S65,100*S70,100*S75,100*S80,100*S85,100*S90,100*S95,names=name,outline=F,ylab='Percent Relative Error',main='Q4',xlab='Resampling percentage') +dev.off()