Mercurial > repos > nilesh > rseqc
diff inner_distance.xml @ 57:f437057e46f1 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rseqc commit 7d7cd4324af66710b89801a1a1c79fb8abf0d146
author | iuc |
---|---|
date | Thu, 27 Sep 2018 14:23:52 -0400 |
parents | 5873cd7afb67 |
children | dbedfc5f5a3c |
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--- a/inner_distance.xml Tue Sep 18 09:11:06 2018 -0400 +++ b/inner_distance.xml Thu Sep 27 14:23:52 2018 -0400 @@ -88,7 +88,7 @@ 1. output.inner_distance.txt: - first column is read ID - -second column is inner distance. Could be negative value if PE reads were overlapped or mapping error (e.g. Read1_start < Read2_start, while Read1_end >> Read2_end due to spliced mapping of read1) + - second column is inner distance. Could be negative value if PE reads were overlapped or mapping error (e.g. Read1_start < Read2_start, while Read1_end >> Read2_end due to spliced mapping of read1) - third column indicates how paired reads were mapped: PE_within_same_exon, PE_within_diff_exon,PE_reads_overlap 2. output..inner_distance_freq.txt: - inner distance starts