Mercurial > repos > nilesh > rseqc

view test-data/output.splice_junction.txt @ 61:5968573462fa draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rseqc commit 8a91236cee4d408ae2b53a3e9b6daebc332d631a
author iuc
date Sat, 10 Dec 2022 11:23:05 +0000
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Reading reference bed file:  /tmp/tmp5v623oz4/files/e/7/2/dataset_e7232361-03db-486f-9792-924d1ac24b1c.dat  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	4
Known Splicing Events:	1
Partial Novel Splicing Events:	1
Novel Splicing Events:	1
Filtered Splicing Events:	1

Total splicing  Junctions:	3
Known Splicing Junctions:	1
Partial Novel Splicing Junctions:	1
Novel Splicing Junctions:	1

===================================================================
Create BED file ...
Create Interact file ...