# HG changeset patch
# User ning
# Date 1363752511 14400
# Node ID b6465cb90cc00e287677b6d3a7802b2b62a92ce6
# Parent  675d21e7fabc1bec6c8e55101f35b49f143fb909
Uploaded

diff -r 675d21e7fabc -r b6465cb90cc0 EBGeneTwoCondTest.xml
--- a/EBGeneTwoCondTest.xml	Wed Mar 20 00:08:20 2013 -0400
+++ b/EBGeneTwoCondTest.xml	Wed Mar 20 00:08:31 2013 -0400
@@ -2,14 +2,14 @@
   <description>Runs EBSeq to find DE genes across two conditions</description>
   <command>R --quiet --slave --file=$GALAXY_ROOT_DIR/tools/EBSeq/EBGeneTwoCondTest.R --args $Gene_Expression $First_Row_Sample_Names $Conditions $Target_FDR $Output $Sorted_Output $Sorted_Output_with_target_FDR $Sizes</command>
   <inputs>
-		<param name="Gene_Expression" type="data" format="tabular" label="Gene Expression (tab eliminated, please use the unnormalized values)"/>
+		<param name="Gene_Expression" type="data" format="tabular" label="Gene Expression (tab delimited, please use the unnormalized values, e.g. expected counts form RSEM)"/>
 		<param name="First_Row_Sample_Names" type="select" format="text">
 			<label>The First Row is Sample Names?</label>
 			<option value="y">Yes</option>
 			<option value="n">No</option>
 			</param>
 		<param name="Conditions" type="text" size="60" value="C1,C2" label="Enter which condition each
-			sample belongs to (seperated by comma, no space please)." 
+			sample belongs to (separated by comma, no space please)." 
 			help=""/>
 		<param name="Target_FDR" type="text" format="tabular" value="0.05" label="Target FDR"
 			/>