Mercurial > repos > nml > collapse_collections
comparison merge.xml @ 0:49bd84e136c7 draft
planemo upload commit f3c3ccefd8615c32713e0b0e8d231ce5151b2714-dirty
| author | nml |
|---|---|
| date | Thu, 10 Dec 2015 12:30:50 -0500 |
| parents | |
| children | a78a70d4806c |
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| -1:000000000000 | 0:49bd84e136c7 |
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| 1 <tool id="collapse_dataset" name="Collapse Collection" version="1.0"> | |
| 2 <description>Collapse collection into single dataset in order of the collection</description> | |
| 3 <command> | |
| 4 cat | |
| 5 #for $f in $input_list# $f #end for# | |
| 6 > $output | |
| 7 </command> | |
| 8 <inputs> | |
| 9 <param name="input_list" type="data_collection" label="Collection of files to collapse into single dataset" help="" optional="false" collection_type="list" /> | |
| 10 </inputs> | |
| 11 <outputs> | |
| 12 <data name="output" format_source="input_list" ></data> | |
| 13 </outputs> | |
| 14 <tests> | |
| 15 <test> | |
| 16 <param name="input_list"> | |
| 17 <collection type="list"> | |
| 18 <element name="input1" value="input1" /> | |
| 19 <element name="input2" value="input2" /> | |
| 20 </collection> | |
| 21 </param> | |
| 22 <output name="output" file="answer.txt"/> | |
| 23 </test> | |
| 24 </tests> | |
| 25 <help> | |
| 26 Single tool that combines a list collection into a single file | |
| 27 </help> | |
| 28 <citations> | |
| 29 </citations> | |
| 30 </tool> |