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date Fri, 13 Apr 2018 13:46:46 -0400
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1 <tool id="combine_json" name="Combine Json" version="0.1">
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2 <description>Combine multiple JSON Arrays</description>
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3 <command detect_errors="exit_code"><![CDATA[
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4 python $__tool_directory__/combineJSON.py
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5
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6 -i
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7
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8 #for $f in $json_files.keys
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9 $json_files[$f]
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10 #end for
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11
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12 -o 'jsoncombined.json'
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13 ]]></command>
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14 <inputs>
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15 <param name="json_files" type="data_collection" label="Collection of JSON arrays" help="" optional="false" collection_type="list"/>
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16 </inputs>
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17 <outputs>
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18 <data format="json" name="jsoncombined.json" from_work_dir="jsoncombined.json" label="Combined JSON Array"/>
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19 </outputs>
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20 <tests>
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21 <test>
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22 <param name="json_files">
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23 <collection type="list">
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24 <element name="json1" value="json1.json" />
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25 <element name="json2" value="json2.json" />
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26 </collection>
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27 </param>
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28 <output name="jsoncombined.json" file="jsoncombined.json" />
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29 </test>
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30 </tests>
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31 <help><![CDATA[
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32 ***************
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33 combine_json
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34 ***************
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35
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36 This tool takes two or more JSON arrays and combines them into one JSON array.
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37
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38 Usage
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39 =====
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40 1) Input JSON files in a dataset collection
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41 2) Click Execute
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42
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43 Example
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44 =======
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45
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46 .. code:: javascript
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47
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48 JsonArray1
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49 [
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50 {hello: test}
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51 ]
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52
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53 JsonArray2
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54 [
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55 {world: testerson}
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56 ]
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57
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58
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59 `combineJson -JsonArray1.json -JsonArray2.json`
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60
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61 .. code:: javascript
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62
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63 JsonCombined
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64 [
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65 {hello: test},
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66 {world: testerson}
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67 ]
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68
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69 ]]></help>
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70 <citations>
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71 <citation type="bibtex">@ARTICLE{a1,
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72 title = {JSON Combine}
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73 author = {Matthew Gopez}
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74 }
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75 }</citation>
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76 </citations>
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77 </tool>