Mercurial > repos > nml > csvtk_correlation

annotate macros.xml @ 0:62448f26c3fa draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
author nml
date Tue, 19 May 2020 17:25:59 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
1 <macros>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
2 <token name="@VERSION@">0.20.0</token>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
3 <token name="@GALAXY_VERSION@">galaxy0</token>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
4 <xml name="requirements">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
5 <requirements>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
6 <requirement type="package" version="@VERSION@">csvtk</requirement>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
7 </requirements>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
8 </xml>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
9 <xml name="version_cmd">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
10 <version_command>csvtk version</version_command>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
11 </xml>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
12 <xml name="text_sanitizer">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
13 <sanitizer>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
14 <valid initial="string.printable">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
15 <remove value="&apos;"/>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
16 </valid>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
17 </sanitizer>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
18 </xml>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
19 <xml name="multi_input">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
20 <param type="data" name="in_1" format="csv,tabular"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
21 multiple="true" optional="false"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
22 label="Specify TSV or CSV file inputs"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
23 help="Input tsv or csv files to analyze. HOWEVER, they must all be the **same file type** or the tool will fail/not give correct results!"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
24 />
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
25 </xml>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
26 <xml name="singular_input">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
27 <param type="data" name="in_1" format="csv,tabular"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
28 multiple="false" optional="false"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
29 label="Specify an input TSV or CSV file"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
30 help="Input a TSV or CSV file to work on"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
31 />
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
32 </xml>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
33 <xml name="ignore_case">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
34 <param type="boolean" name="ignore_case"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
35 falsevalue="" truevalue="-i"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
36 checked="false"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
37 argument="-i"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
38 label="Ignore cell case?"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
39 help="ABC == abc"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
40 />
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
41 </xml>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
42 <xml name="global_parameters">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
43 <section name="global_param" title="csvtk Global Parameters" expanded="false">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
44 <param type="boolean" name="header"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
45 falsevalue="-H" truevalue=""
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
46 checked="true"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
47 argument="-H"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
48 label="Input file has a header line"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
49 />
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
50 <param type="boolean" name="illegal_rows"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
51 falsevalue="" truevalue="-I"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
52 checked="false"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
53 argument="-I"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
54 label="Ignore illegal rows"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
55 help="Use if file has illegal rows as defined in the help section"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
56 />
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
57 <param type="boolean" name="empty_rows"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
58 falsevalue="" truevalue="-E"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
59 checked="false"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
60 argument="-E"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
61 label="Ignore empty rows"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
62 help="Ignore rows with no data (only needed if input has empty rows)"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
63 />
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
64 <param type="boolean" name="lazy_quotes"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
65 falsevalue="" truevalue="-l"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
66 checked="false"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
67 argument="-l"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
68 label="File has Lazy quotes"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
69 help="(TSV files only) If Yes, a quote may appear in an unquoted field and a non-doubled quote may appear in a quoted field"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
70 />
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
71 </section>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
72 </xml>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
73 <xml name="fields_input">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
74 <conditional name="column_text" >
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
75 <param type="select" name="select" label="Select input column(s) based on" argument="-F -f">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
76 <option value="string">Column Name(s)</option>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
77 <option value="column">Column Number(s)</option>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
78 </param>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
79 <when value="column">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
80 <param type="data_column" name="in_text"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
81 data_ref="in_1"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
82 multiple="true"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
83 label="Input column number(s)"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
84 help="Select column(s) to use for analysis"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
85 />
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
86 </when>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
87 <when value="string">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
88 <param type="text" name="in_text"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
89 optional="false"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
90 label="Input column name(s)"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
91 help="Multiple columns can be given if separated by a ' , '.
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
92 Column numbers can be given too - ex. '1,2' will target columns 1 and 2.
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
93 Please see the help section below for more detailed info">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
94 <sanitizer>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
95 <valid initial="string.printable">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
96 <remove value="&apos;"/>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
97 </valid>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
98 </sanitizer>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
99 </param>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
100 </when>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
101 </conditional>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
102 </xml>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
103 <xml name="singular_fields_input">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
104 <conditional name="column_text" >
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
105 <param type="select" name="select" label="Select input column based on" argument="-f">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
106 <option value="string">Column Name</option>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
107 <option value="column">Column Number</option>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
108 </param>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
109 <when value="column">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
110 <param type="data_column" name="in_text"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
111 data_ref="in_1"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
112 multiple="false"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
113 label="Input column number"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
114 help="Select column to use for analysis"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
115 />
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
116 </when>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
117 <when value="string">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
118 <param type="text" name="in_text"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
119 optional="false"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
120 label="Input column name"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
121 help="Input column name or number ex. 'Length' or '1'.
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
122 Please see the help section below for more detailed info">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
123 <sanitizer>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
124 <valid initial="string.printable">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
125 <remove value="&apos;"/>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
126 </valid>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
127 </sanitizer>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
128 </param>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
129 </when>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
130 </conditional>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
131 </xml>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
132 <xml name="plot_field">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
133 <conditional name="column_text" >
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
134 <param type="select" name="select" label="Select input data column based on" argument="-f">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
135 <option value="string">Column Name</option>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
136 <option value="column">Column Number</option>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
137 </param>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
138 <when value="column">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
139 <param type="data_column" name="in_text"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
140 data_ref="in_1"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
141 multiple="false"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
142 label="Input data column number"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
143 />
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
144 </when>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
145 <when value="string">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
146 <param type="text" name="in_text"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
147 optional="false"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
148 label="Input data column name"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
149 help="Can use column name or column number">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
150 <sanitizer>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
151 <valid initial="string.printable">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
152 <remove value="&apos;"/>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
153 </valid>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
154 </sanitizer>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
155 </param>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
156 </when>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
157 </conditional>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
158 </xml>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
159 <xml name="groups_input">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
160 <conditional name="group_field" >
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
161 <param type="select" name="select_group" label="Select column to group data" argument="-g" optional="false" help="Specify a single column that is used to create data groups. An example is shown in the help section">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
162 <option value="none">None</option>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
163 <option value="string">Column Name</option>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
164 <option value="column">Column Number</option>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
165 </param>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
166 <when value="none" />
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
167 <when value="column">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
168 <param type="data_column" name="in_text"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
169 data_ref="in_1"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
170 multiple="false"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
171 label="Group by column number"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
172 />
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
173 </when>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
174 <when value="string">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
175 <param type="text" name="in_text"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
176 optional="false"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
177 label="Group by column name"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
178 help="Can use column name or number">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
179 <sanitizer>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
180 <valid initial="string.printable">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
181 <remove value="&apos;"/>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
182 </valid>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
183 </sanitizer>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
184 </param>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
185 </when>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
186 </conditional>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
187 </xml>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
188 <xml name="global_plot_parameters">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
189 <section name="plot_parameters" title="Advanced Optional Plot Parameters" expanded="false">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
190 <param type="float" name="figure_height"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
191 argument="--height"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
192 optional="true"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
193 label="Figure Height (Default 4.5)"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
194 />
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
195 <param type="float" name="figure_width"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
196 argument="--width"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
197 optional="true"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
198 label="Figure Width (Default 1.5)"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
199 />
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
200 <param type="float" name="tick_width"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
201 argument="--tick-width"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
202 optional="true"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
203 label="Axis Tick Width (Default 1.5)"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
204 />
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
205 <param type="text" name="title"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
206 argument="--title"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
207 optional="true"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
208 label="Specify Figure Title">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
209 <sanitizer>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
210 <valid initial="string.printable">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
211 <remove value="&apos;"/>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
212 </valid>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
213 </sanitizer>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
214 </param>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
215 <param type="text" name="x_label"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
216 argument="--xlab"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
217 optional="true"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
218 label="Specify X-axis label">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
219 <sanitizer>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
220 <valid initial="string.printable">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
221 <remove value="&apos;"/>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
222 </valid>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
223 </sanitizer>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
224 </param>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
225 <param type="float" name="min_x"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
226 argument="--x-min"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
227 optional="true"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
228 label="Minimum value of X-axis (float)"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
229 />
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
230 <param type="float" name="max_x"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
231 argument="--x-max"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
232 optional="true"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
233 label="Maximum value of X-axis (float)"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
234 />
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
235 <param type="text" name="y_label"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
236 argument="--ylab"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
237 optional="true"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
238 label="Specify Y-axis label">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
239 <sanitizer>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
240 <valid initial="string.printable">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
241 <remove value="&apos;"/>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
242 </valid>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
243 </sanitizer>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
244 </param>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
245 <param type="float" name="min_y"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
246 argument="--y-min"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
247 optional="true"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
248 label="Minimum value of Y-axis (float)"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
249 />
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
250 <param type="float" name="max_y"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
251 argument="--y-max"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
252 optional="true"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
253 label="Maximum value of Y-axis (float)"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
254 />
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
255 </section>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
256 </xml>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
257 <token name="@HELP_COLUMNS@">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
258 Column Name Input Help
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
259 ######################
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
260
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
261 - Multiple names can be given if separated by a ' , '.
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
262
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
263 - ex. 'ID,Organism' would target the columns named ID and Organism for the function
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
264
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
265 - Column names are case SeNsitive
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
266
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
267 - Column numbers can also be given:
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
268
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
269 -ex. '1,2,3' or '1-3' for inputting columns 1-3.
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
270
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
271 - You can also specify all but unwanted column(s) with a ' - '.
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
272
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
273 - ex. '-ID' would target all columns but the ID column
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
274
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
275 ----
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
276 </token>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
277 <token name="@HELP_INPUT_DATA@">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
278 Input Data
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
279 ##########
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
280
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
281 ::
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
282
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
283 **Limitations of Input Data**
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
284
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
285 1. The CSV parser requires all the lines have same number of fields/columns.
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
286 If your file has illegal rows, set the "Illegal Rows" parameter to "Yes" to pass your data through
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
287 Even lines with spaces will cause error.
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
288 Example bad table below.
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
289
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
290 2. By default, csvtk thinks files have header rows. If your file does not, set global parameter
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
291 "Has Header Row" to "No"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
292
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
293 3. Column names should be unique and are case sensitive!
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
294
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
295 4. Lines starting with "#" or "$" will be ignored, if in the header row
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
296
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
297 5. If " exists in tab-delimited files, set Lazy quotes global parameter to "Yes"
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
298
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
299 Example bad table:
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
300
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
301 +--------+--------+--------+--------+
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
302 | Head 1 | Head 2 | Head 3 | Head 3 |
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
303 +========+========+========+========+
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
304 | 1 | 2 | 3 | |
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
305 +--------+--------+--------+--------+
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
306 | this | will | | break |
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
307 +--------+--------+--------+--------+
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
308
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
309 Bad tables may work if both the "Ignore Illegal Rows" and "Ignore Empty Rows" global parameters are set to "Yes",
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
310 But there is no guarentee of that!
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
311
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
312 ----
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
313 </token>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
314 <token name="@HELP_END_STATEMENT@">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
315 More Information
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
316 ################
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
317 For information from the creators of csvtk, please visit their site at: https://bioinf.shenwei.me/csvtk/
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
318
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
319 Although be aware that some features may not be available and some small changes were made to work with Galaxy.
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
320
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
321 **Notable changes from their documentation:**
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
322
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
323 - Cannot specify multiple file header names (IE cannot use "name;username" as a valid column match)
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
324
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
325 - No single quotes / apostrophes allowed in text inputs
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
326 </token>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
327 <xml name="citations">
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
328 <citations>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
329 <citation type="bibtex">@ARTICLE{a1,
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
330 title = {csvtk - CSV/TSV Toolkit},
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
331 author = {Wei Shen},
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
332 url = {https://github.com/shenwei356/csvtk}
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
333 }
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
334 }</citation>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
335 </citations>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
336 </xml>
62448f26c3fa "planemo upload for repository https://github.com/shenwei356/csvtk commit 3a97e1b79bf0c6cdd37d5c8fb497b85531a563ab"
nml
parents:
diff changeset
337 </macros>