Mercurial > repos > nml > fasta2bed
diff test-data/contigs.fasta @ 0:1b3c339fd390 draft default tip
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
author | nml |
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date | Wed, 11 Oct 2017 11:46:25 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/contigs.fasta Wed Oct 11 11:46:25 2017 -0400 @@ -0,0 +1,40 @@ +>lcl|AF319579.1_cds_AAN14420.1_1 [gene=dnaA] [protein=DnaA] [protein_id=AAN14420.1] [location=1090..2430] [gbkey=CDS] +TTGGAAAATATCTCTGATTTATGGAATAGTGCCTTAAAAGAATTAGAAAAAAAGGTAAGCAAGCCAAGTT +ATGAAACCTGGTTAAAATCAACAACTGCTCATAACTTAAAAAAAGATGTATTAACTATTACAGCTCCAAA +TGAATTCGCTCGTGACTGGCTAGAATCTCATTATTCGGAACTAATCTCCGAAACACTTTATGATTTAACA +GGGGCAAAACTAGCTATTCGTTTTATCATTCCCCAAAGTCAGGCAGAAGAGGATATAGATCTCCCTTCTG +TTAAGCAAAAACACGCACATGATGAGTCTAATCACTTACCACAGAGTATGTTAAACCCAAAATATACATT +TGATACATTTGTTATTGGCTCTGGTAATCGTTTTGCACATGCTGCTTCTTTAGCTGTAGCTGAAGCACCA +GCTAAAGCCTATAATCCGCTCTTTATTTACGGGGGCGTTGGACTTGGAAAAACACATTTAATGCACGCAA +TTGGGCATTATGTAATTGAACACAACCCAAATGCAAAAGTTGTATATTTATCATCTGAAAAATTTACAAA +TGAATTTATTAATTCAATTCGTGATAATAAAGCTGTCGATTTTCGTAATAAATATCGTAATGTAGATGTC +TTATTGATAGATGATATTCAATTTCTTGCTGGAAAAGAACAAACACAGGAAGAGTTTTTCCATACATTTA +ATGCGTTACATGAAGAAAGTAAACAAATTGTGATTTCAAGCGATAGACCACCAAAAGAAATCCCAACTTT +AGAAGATCGCCTTCGTTCTCGCTTTGAATGGGGGTTAATTACGGACATTACGCCACCAGATTTAGAAACC +AGAATCGCAATTTTACGTAAAAAAGCAAAAGCAGAAGGTCTTGATATACCAAATGAAGTTATGCTTTATA +TCGCAAATCAAATCGATTCAAATATTCGTGAACTAGAGGGTGCACTTATTCGAGTTGTAGCTTATTCATC +TTTAATTAATAAAGATATGAATGCTGATTTAGCGGCTGAAGCGCTTAAAAATATTATTCCAAACTCTATA +CCTAGAATTATTTCTATTTCTGATATTCAAAAGGCTGTTGGGGGCGTCTATCAAGTAAAATTAGAAGATT +TCAAAGCAAAAAAACGGACAAAATCCGTTGCATTCCCTCGCCAAATTGCGATGTATTTATCACGTGAACT +TACGGACTCATCTTTGCCAAAAATAGGTGAAGAATTTGGTGGCCGCGATCATACAACAGTAATCCATGCT +CACGAAAAAATTTCGAAGCTATTAAAAACGGATACTCAATTACAAAAACACGTTGAAGAAGTTAAGGATA +TTTTAAAATAG +>lcl|AF319579.1_cds_AAN14421.1_2 [gene=dnaN] [protein=DNA polymerase III beta chain] [protein_id=AAN14421.1] [location=2613..3758] [gbkey=CDS] +ATGCGTTTTACAATACAAAAAGACTATCTTGTAAGAAGTGTACAAGATGTAATGAAGGCAGTTTCTTCTC +GTACAACAATTCCAATTCTTACAGGGATTAAAGTTGTAGCAACTGAAGAAGGAGTTACTTTAACAGGTAG +TGATGCAGACATCTCTATCGAATCATTTATCCCAGTCGAAGATGCTGGAAAAGAAATTGTGGAAATTGAA +CAAACAGGAAGTATTATTTTACAAGCAAAATATTTTAGTGAGATCGTAAAAAAATTACCTAAAGAAACTG +TCGAAATTTCTGTAGAAAATCATTTTATGACAAAAATAAAATCTGGAAAATCAGAGTTCAACTTAAATGG +TTTAGATGCTGCTGAATATCCGTTATTACCACAAATCGAAGAACATCATGTATTTAAGATTCCAACAGAT +TTACTAAAGCACATGATTCGTCAAACAGTATTTGCAGTTTCAAGTTCTGAAACAAGACCGATCTTGACAG +GTGTAAACTGGAAGGTATATAACAGCGAGCTAACTTGTATTGCAACAGATAGTCACAGACTAGCACTTCG +TAAAGCAAAAATCGAAGGGTATAATATTGCCGATGAATTTCAAGCGAATGTCGTTATTCCTGGTAAGAGC +TTAAGTGAATTAAGTAAAATTCTAGATGAATCTGAAGAAATGGTAGATATCGTTATTACGGAGTATCAAG +TATTATTCCGTACAAAACATTTATTATTCTTCTCAAGATTATTAGAAGGAAATTATCCAGATACAACGCG +TTTAATTCCAGCTGAAAGTAAAACTGATATATTTGTAAATACAAAAGAATTTTTACAAGCGATTGATCGT +GCGTCGCTGTTAGCAAGAGATGGTCGTAACAACGTTGTTAAATTATCGACATTAGAACAACAGATGTTAG +AGATTTCTTCGAATGCACCAGAAATCGGAAAAGTAGTAGAAGAGGTTCAATGTGAAAATGTAGATGGAGA +AGAATTAAAAATATCTTTTAGTGCAAAATATATGATGGACGCATTAAAGGCTTTAGACAGTACAGAAATT +AAAGTTAGTTTTACTGGAGCGATGAGACCGTTTTTAATTCGCACAGTAAATGATAATTCCATTATCCAAT +TAATTTTACCAGTCCGTACTTACTAA +