Mercurial > repos > nml > filter_stats

comparison filter-stats.xml @ 1:2fbea749a1d1 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/phac-nml/snvphyl-galaxy commit 57067916cb7b9c5b65c1da59d4bbb846c3e3af2f"
author nml
date Tue, 23 Jun 2020 10:25:53 -0400
parents 89c3ba37711c
children
comparison
equal deleted inserted replaced
0:89c3ba37711c 1:2fbea749a1d1
1 <tool id="filterstat" name="Filter Stats" version ="1.8.2"> 1 <tool id="filterstat" name="Filter Stats" version ="@VERSION@+galaxy1">
2 <description>Identify number of positions excluded based on filtered status</description> 2 <description>Identify number of positions excluded based on filtered status</description>
3 <requirements> 3 <macros>
4 <requirement type="package" version="1.8.2">snvphyl-tools</requirement> 4 <import>macros.xml</import>
5 </requirements> 5 </macros>
6 <expand macro="requirements"/>
6 <command detect_errors="exit_code"> 7 <command detect_errors="exit_code">
7 filter-stats.pl -i $tabfile 8 filter-stats.pl -i $tabfile
8 #if $summary: 9 #if $summary:
9 -a 10 -a
10 #end if 11 #end if
41 42
42 43
43 **Options** 44 **Options**
44 - -all When this option is set, the summary will include all the entries marked as 'filtered-invalid' 45 - -all When this option is set, the summary will include all the entries marked as 'filtered-invalid'
45 </help> 46 </help>
46 <citations> 47 <expand macro="citations"/>
47 </citations>
48 </tool> 48 </tool>